RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 TIMP4Q99727 224 aa10.09□□□□□ -0.79
SNX13-202ENST00000409604 ESRP2Q9H6T0 727 aaKnown RBP10.09□□□□□ -0.79
SNX13-202ENST00000409604 NUDT15Q9NV35 164 aa10.09□□□□□ -0.79
SNX13-202ENST00000409604 PLXND1Q9Y4D7 1925 aa10.09□□□□□ -0.79
SNX13-202ENST00000409604 TMEM235A6NFC5 223 aa10.09□□□□□ -0.79
SNX13-202ENST00000409604 TAF4O00268 1085 aa10.09□□□□□ -0.79
SNX13-202ENST00000409604 NRASP01111 189 aa10.09□□□□□ -0.79
SNX13-202ENST00000409604 STOMP27105 288 aa10.09□□□□□ -0.79
SNX13-202ENST00000409604 GRB2P62993 217 aaKnown RBP10.09□□□□□ -0.79
SNX13-202ENST00000409604 HNF4GQ14541 408 aa10.09□□□□□ -0.79
SNX13-202ENST00000409604 ZNF517Q6ZMY9 492 aaPredicted RBP10.09□□□□□ -0.79
SNX13-202ENST00000409604 MEX3BQ6ZN04 569 aaKnown RBP10.09□□□□□ -0.79
SNX13-202ENST00000409604 NUFIP2Q7Z417 695 aaKnown RBP10.09□□□□□ -0.79
SNX13-202ENST00000409604 SLC30A7Q8NEW0 376 aa10.09□□□□□ -0.79
SNX13-202ENST00000409604 ASB10Q8WXI3 467 aa10.09□□□□□ -0.79
SNX13-202ENST00000409604 THAP7Q9BT49 309 aaPredicted RBP10.09□□□□□ -0.79
SNX13-202ENST00000409604 DPAGT1Q9H3H5 408 aa10.09□□□□□ -0.79
SNX13-202ENST00000409604 SIAEQ9HAT2 523 aa10.09□□□□□ -0.79
SNX13-202ENST00000409604 A0A0G2JMP0 313 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 A0A0X1KG70 313 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 AQP7P3A6NL99 342 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 UBCP0CG48 685 aaKnown RBP10.08□□□□□ -0.8
SNX13-202ENST00000409604 PRKACAP17612 351 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 CEBPEQ15744 281 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 PLA2G2CQ5R387 149 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 DND1Q8IYX4 353 aaKnown RBP10.08□□□□□ -0.8
SNX13-202ENST00000409604 PARP16Q8N5Y8 322 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 TMEM185AQ8NFB2 350 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 OR4M2Q8NGB6 313 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 SMIM19Q96E16 107 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 CMSS1Q9BQ75 279 aaKnown RBP10.08□□□□□ -0.8
SNX13-202ENST00000409604 PCDHB16Q9NRJ7 776 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 TP53BP1Q12888 1972 aaPredicted RBP10.08□□□□□ -0.8
SNX13-202ENST00000409604 TO15178 435 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 AKR7A2O43488 359 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 RAB3DO95716 219 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 RNPS1Q15287 305 aaKnown RBP10.08□□□□□ -0.8
SNX13-202ENST00000409604 PLEKHN1Q494U1 663 aaPredicted RBP10.08□□□□□ -0.8
SNX13-202ENST00000409604 CCL17Q92583 94 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 CMBLQ96DG6 245 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 SCP2D1Q9UJQ7 156 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 TRAPPC2LQ9UL33 140 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 PTPRSQ13332 1948 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 PEX14O75381 377 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 TGM6O95932 706 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 GIFP27352 417 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 LSAMPQ13449 338 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 AKAP14Q86UN6 197 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 SLC22A24Q8N4F4 322 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 ZNF610Q8N9Z0 462 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 OR4M1Q8NGD0 313 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 EMG1Q92979 244 aaKnown RBP10.08□□□□□ -0.8
SNX13-202ENST00000409604 NARS2Q96I59 477 aaKnown RBP10.08□□□□□ -0.8
SNX13-202ENST00000409604 CDCA4Q9BXL8 241 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 GPN1Q9HCN4 374 aaPredicted RBP10.08□□□□□ -0.8
SNX13-202ENST00000409604 KCNN3Q9UGI6 736 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 MRM2Q9UI43 246 aaKnown RBP10.08□□□□□ -0.8
SNX13-202ENST00000409604 KCNMB2Q9Y691 235 aa10.08□□□□□ -0.8
SNX13-202ENST00000409604 IGLV3-12A0A075B6K2 115 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 FXYD6-FXYD2A0A087WZ82 144 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 ARRDC5A6NEK1 342 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 C1QTNF9BB2RNN3 333 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 ZNF732B4DXR9 585 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 SDCBPO00560 298 aaPredicted RBP10.07□□□□□ -0.8
SNX13-202ENST00000409604 WISP1O95388 367 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 C1QTNF9P0C862 333 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 ALOX5APP20292 161 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 RAD52P43351 418 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 ZNF770Q6IQ21 691 aaPredicted RBP10.07□□□□□ -0.8
SNX13-202ENST00000409604 OR51A2Q8NGJ7 313 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 NUDCD2Q8WVJ2 157 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 THRSPQ92748 146 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 CHRNA10Q9GZZ6 450 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 FXYD6Q9H0Q3 95 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 METTL9Q9H1A3 318 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 SLC26A1Q9H2B4 701 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 PALMDQ9NP74 551 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 DLL3Q9NYJ7 618 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 R4GMQ9 66 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 MS4A18H0YCH9 400 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 ZIC3O60481 467 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 SLC19A2O60779 497 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 PI3P19957 117 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 ALDH3B2P48448 385 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 NKX2-5P52952 324 aaPredicted RBP10.07□□□□□ -0.8
SNX13-202ENST00000409604 MFGE8Q08431 387 aaPredicted RBP10.07□□□□□ -0.8
SNX13-202ENST00000409604 PCK2Q16822 640 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 MS4A18Q3C1V0 323 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 YIF1BQ5BJH7 314 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 OR2A2Q6IF42 318 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 ADAM5Q6NVV9 412 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 Q6ZTK2 550 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 OR5H2Q8NGV7 314 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 HGDQ93099 445 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 RAB3CQ96E17 227 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 SORCS2Q96PQ0 1159 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 CLEC4MQ9H2X3 399 aaPredicted RBP10.07□□□□□ -0.8
SNX13-202ENST00000409604 EPHA1P21709 976 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 GDPGP1Q6ZNW5 385 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 SLC26A10Q8NG04 563 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms