RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 CDONQ4KMG0 1287 aa14.37□□□□□ -0.11
HMGA1P7-201ENST00000406908 ZCCHC24Q8N2G6 241 aaKnown RBP14.37□□□□□ -0.11
HMGA1P7-201ENST00000406908 RNF166Q96A37 237 aaPredicted RBP14.37□□□□□ -0.11
HMGA1P7-201ENST00000406908 MBD6Q96DN6 1003 aa14.37□□□□□ -0.11
HMGA1P7-201ENST00000406908 SIGLEC11Q96RL6 698 aa14.37□□□□□ -0.11
HMGA1P7-201ENST00000406908 ALG8Q9BVK2 526 aa14.37□□□□□ -0.11
HMGA1P7-201ENST00000406908 JAM3Q9BX67 310 aa14.37□□□□□ -0.11
HMGA1P7-201ENST00000406908 SP140LQ9H930 580 aa14.37□□□□□ -0.11
HMGA1P7-201ENST00000406908 INPP5EQ9NRR6 644 aa14.37□□□□□ -0.11
HMGA1P7-201ENST00000406908 CNOT2Q9NZN8 540 aaKnown RBP14.37□□□□□ -0.11
HMGA1P7-201ENST00000406908 PURGQ9UJV8 347 aaKnown RBP14.37□□□□□ -0.11
HMGA1P7-201ENST00000406908 EFCAB10A6NFE3 127 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 ACOD1A6NK06 481 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 SLC1A7O00341 560 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 DENRO43583 198 aaKnown RBP14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 PIPP12273 146 aaPredicted RBP14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 KITLGP21583 273 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 ALDH3B1P43353 468 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 CSNK2BP67870 215 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 DEFB113Q30KQ7 82 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 OR2T2Q6IF00 324 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 AHSA2Q719I0 299 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 OR8B12Q8NGG6 310 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 OR52H1Q8NGJ2 320 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 RORBQ92753 470 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 TMEM80Q96HE8 168 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 REPIN1Q9BWE0 567 aaKnown RBP14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 OR10A2Q9H208 303 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 CXorf56Q9H5V9 222 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 G6PC2Q9NQR9 355 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 ACOXLQ9NUZ1 547 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 ZNF701Q9NV72 531 aaPredicted RBP14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 FKBP14Q9NWM8 211 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 UBAP1Q9NZ09 502 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 GNG8Q9UK08 70 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 DIMT1Q9UNQ2 313 aaKnown RBP14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 R4GMQ9 66 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 PMF1-BGLAPU3KQ54 211 aa14.36□□□□□ -0.11
HMGA1P7-201ENST00000406908 LRBAP50851 2863 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 LOC110117498-PIK3R3F6TDL0 507 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 J3QLW9 94 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 M0R233 179 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 XRCC2O43543 280 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 NDUFS7O75251 213 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 BMP4P12644 408 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 ZNF19P17023 458 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 C21orf33P30042 268 aaPredicted RBP14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 PSMB10P40306 273 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 ETV1P50549 477 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 MMP15P51511 669 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 NKPD1Q17RQ9 610 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 ZNF829Q3KNS6 432 aaPredicted RBP14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 PGAP1Q75T13 922 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 KCTD20Q7Z5Y7 419 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 ZNF540Q8NDQ6 660 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 SGCDQ92629 289 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 GTF3AQ92664 365 aaKnown RBP14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 SPSB4Q96A44 273 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 SOX7Q9BT81 388 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 PBOV1Q9GZY1 135 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 ISG20L2Q9H9L3 353 aaKnown RBP14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 DYNLRB1Q9NP97 96 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 BEX4Q9NWD9 120 aaPredicted RBP14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 CLEC2DQ9UHP7 191 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 ANKRD17O75179 2603 aaKnown RBP14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 TACC2O95359 2948 aa14.35□□□□□ -0.11
HMGA1P7-201ENST00000406908 PTGES3LE9PB15 166 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 H7C417 338 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 TIMM8AO60220 97 aaPredicted RBP14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 LILRA1O75019 489 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 TACSTD2P09758 323 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 CCDC159P0C7I6 412 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 NAT2P11245 290 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 PAX1P15863 534 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 PPOXP50336 477 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 MOGQ16653 247 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 TIGD6Q17RP2 521 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 MRPL21Q7Z2W9 205 aaKnown RBP14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 FAM220AQ7Z4H9 259 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 OR5AS1Q8N127 324 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 SYS1Q8N2H4 156 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 STX19Q8N4C7 294 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 REEP6Q96HR9 211 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 LYZL4Q96KX0 146 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 C4orf36Q96KX1 117 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 VRK1Q99986 396 aaPredicted RBP14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 Q9H521 79 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 PAK1IP1Q9NWT1 392 aaPredicted RBP14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 SCN3BQ9NY72 215 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 NUFIP1Q9UHK0 495 aaKnown RBP14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 OR52A1Q9UKL2 312 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 GTF2A1LQ9UNN4 478 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 SLC22A13Q9Y226 551 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 EXOSC1Q9Y3B2 195 aaKnown RBP14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 SNX5Q9Y5X3 404 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 PDZD2O15018 2839 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 CCDC168Q8NDH2 2452 aa14.34□□□□□ -0.11
HMGA1P7-201ENST00000406908 CD300LBA8K4G0 201 aa14.33□□□□□ -0.12
HMGA1P7-201ENST00000406908 IQCF6A8MYZ5 107 aa14.33□□□□□ -0.12
HMGA1P7-201ENST00000406908 TTRP02766 147 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms