RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 B3GAT1Q9P2W7 334 aa8.08□□□□□ -1.12
LIG4-202ENST00000405925 CACNA1AO00555 2505 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 A0A0G2JMP0 313 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 A0A0X1KG70 313 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 NAP1L6A6NFF2 107 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 BET1O15155 118 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 TFP02787 698 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 RAD52P43351 418 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 TMPRSS3P57727 454 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 CTF1Q16619 201 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 TSPO2Q5TGU0 170 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 SLC25A26Q70HW3 274 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 TSEN54Q7Z6J9 526 aaKnown RBP8.07□□□□□ -1.12
LIG4-202ENST00000405925 OR4M2Q8NGB6 313 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 MRM2Q9UI43 246 aaKnown RBP8.07□□□□□ -1.12
LIG4-202ENST00000405925 TRAPPC2LQ9UL33 140 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 CHCHD2Q9Y6H1 151 aaPredicted RBP8.07□□□□□ -1.12
LIG4-202ENST00000405925 MYLKQ15746 1914 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 IGKV1D-42A0A075B6H8 117 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 ELK1P19419 428 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 ZNF85Q03923 595 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 OR8B8Q15620 311 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 CDONQ4KMG0 1287 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 BEND4Q6ZU67 534 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 LSRQ86X29 649 aaPredicted RBP8.07□□□□□ -1.12
LIG4-202ENST00000405925 DEFB108BQ8NET1 73 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 CA5BP1Q8WTZ4 195 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 DOK1Q99704 481 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 SYT3Q9BQG1 590 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 ZNF286AQ9HBT8 521 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 NEUROG3Q9Y4Z2 214 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 PLPP2O43688 288 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 RFPL3SP0C7P2 107 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 EDDM3AQ14507 147 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 TAF9Q16594 264 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 SLC25A35Q3KQZ1 300 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 NRARPQ7Z6K4 114 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 FAM122AQ96E09 287 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 PRRT1Q99946 306 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 ETAA1Q9NY74 926 aa8.07□□□□□ -1.12
LIG4-202ENST00000405925 NUP210Q8TEM1 1887 aaPredicted RBP8.07□□□□□ -1.12
LIG4-202ENST00000405925 ZNF816-ZNF321PA0A0X1KG74 233 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 DCTN6O00399 190 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 ANGPTL7O43827 346 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 UPK3AO75631 287 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 PVALBP20472 110 aaPredicted RBP8.06□□□□□ -1.12
LIG4-202ENST00000405925 ARHGDIBP52566 201 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 EDDM3BP56851 147 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 RBM39Q14498 530 aaKnown RBP8.06□□□□□ -1.12
LIG4-202ENST00000405925 MEF2DQ14814 521 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 SWI5Q1ZZU3 235 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 STEAP3Q658P3 488 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 OR2T2Q6IF00 324 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 WDSUB1Q8N9V3 476 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 SLC30A7Q8NEW0 376 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 BEST4Q8NFU0 473 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 OR6S1Q8NH40 331 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 SLC39A7Q92504 469 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 EGLN1Q9GZT9 426 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 HSPB11Q9Y547 144 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 AKAP6Q13023 2319 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 ZNF318Q5VUA4 2279 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 LOC102723996A0A087X1L8 192 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 TMEM235A6NFC5 223 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 TK1P04183 234 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 CHRM2P08172 466 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 SELEP16581 610 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 HAAOP46952 286 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 ID4P47928 161 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 PAN3Q58A45 887 aaKnown RBP8.06□□□□□ -1.12
LIG4-202ENST00000405925 RTL6Q6ICC9 239 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 RGS7BPQ6MZT1 257 aaPredicted RBP8.06□□□□□ -1.12
LIG4-202ENST00000405925 ZDHHC23Q8IYP9 409 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 ELMOD2Q8IZ81 293 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 CMTM1Q8IZ96 169 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 OR56B2PQ8NGI1 322 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 PARD6AQ9NPB6 346 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 GLRX2Q9NS18 164 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 BPNT1O95861 308 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 THY1P04216 161 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 CFAP77Q6ZQR2 320 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 OR4K15Q8NH41 348 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 COQ8AQ8NI60 647 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 PP6455Q8WZ26 134 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 RDH5Q92781 318 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 DVL3Q92997 716 aaPredicted RBP8.06□□□□□ -1.12
LIG4-202ENST00000405925 RRNAD1Q96FB5 475 aaKnown RBP8.06□□□□□ -1.12
LIG4-202ENST00000405925 PPA2Q9H2U2 334 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 BCO1Q9HAY6 547 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 GPR35Q9HC97 309 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 POLDIP2Q9Y2S7 368 aa8.06□□□□□ -1.12
LIG4-202ENST00000405925 OR2AT4A6NND4 320 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 H7C417 338 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 SULT1B1O43704 296 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 ADAM11O75078 769 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 SEMA7AO75326 666 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 EPXP11678 715 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 PRKACAP17612 351 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 PCMT1P22061 227 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 LSM6P62312 80 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms