RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 GLYATL3Q5SZD4 288 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 OR2T2Q6IF00 324 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 SPNS3Q6ZMD2 512 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 PLEKHG7Q6ZR37 379 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 PRSS45Q7RTY3 260 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 MRPL21Q7Z2W9 205 aaKnown RBP11.7□□□□□ -0.54
VPREB1-202ENST00000403807 SGK3Q96BR1 496 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 LGALS12Q96DT0 336 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 DIRC2Q96SL1 478 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
VPREB1-202ENST00000403807 TTTY10Q9BZA0 68 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 OPA3Q9H6K4 179 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 MRPS18AQ9NVS2 196 aaKnown RBP11.7□□□□□ -0.54
VPREB1-202ENST00000403807 NKIRAS2Q9NYR9 191 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 ZDHHC8Q9ULC8 765 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 MYO9AB2RTY4 2548 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 GGT3PA6NGU5 568 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 METTL15A6NJ78 407 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 J3QRE1 110 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 SULT1C4O75897 302 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 CFL1P23528 166 aaKnown RBP11.69□□□□□ -0.54
VPREB1-202ENST00000403807 PSMA6P60900 246 aaKnown RBP11.69□□□□□ -0.54
VPREB1-202ENST00000403807 ZNF92Q03936 586 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 CDK5R2Q13319 367 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 CLEC12BQ2HXU8 276 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 TMEM255AQ5JRV8 349 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 KCTD20Q7Z5Y7 419 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 THAP5Q7Z6K1 395 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 OR5AS1Q8N127 324 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 ACBD7Q8N6N7 88 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 YIPF7Q8N8F6 280 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 OR8G5Q8NG78 346 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 OR2AE1Q8NHA4 323 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 CNIH3Q8TBE1 160 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 SPRYD4Q8WW59 207 aaPredicted RBP11.69□□□□□ -0.54
VPREB1-202ENST00000403807 SPSB4Q96A44 273 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 MRPL48Q96GC5 212 aaKnown RBP11.69□□□□□ -0.54
VPREB1-202ENST00000403807 REEP6Q96HR9 211 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 RGCCQ9H4X1 137 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 MSL2Q9HCI7 577 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 MYOZ1Q9NP98 299 aaPredicted RBP11.69□□□□□ -0.54
VPREB1-202ENST00000403807 DECR2Q9NUI1 292 aa11.69□□□□□ -0.54
VPREB1-202ENST00000403807 MRM2Q9UI43 246 aaKnown RBP11.69□□□□□ -0.54
VPREB1-202ENST00000403807 AKAP9Q99996 3911 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 IRGMA1A4Y4 181 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 IQCF6A8MYZ5 107 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 PRR32B1ATL7 298 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 MAGEB4O15481 346 aaPredicted RBP11.68□□□□□ -0.54
VPREB1-202ENST00000403807 TPD52L2O43399 206 aaKnown RBP11.68□□□□□ -0.54
VPREB1-202ENST00000403807 SPRY3O43610 288 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 GNAO1P09471 354 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 TACSTD2P09758 323 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 CSF3P09919 207 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 DAOP14920 347 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 TNFSF4P23510 183 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 DDOSTP39656 456 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 VHLP40337 213 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 HSPA13P48723 471 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 MMP16P51512 607 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 ZNF85Q03923 595 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 SMN1Q16637 294 aaKnown RBP11.68□□□□□ -0.54
VPREB1-202ENST00000403807 TSTQ16762 297 aaKnown RBP11.68□□□□□ -0.54
VPREB1-202ENST00000403807 FAM209AQ5JX71 171 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 C6orf52Q5T4I8 152 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 CLEC2AQ6UVW9 174 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 SSX6Q7RTT6 188 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 KRTAP1-3Q8IUG1 177 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 RFLNBQ8N5W9 214 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 WFDC11Q8NEX6 87 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 OR13G1Q8NGZ3 307 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 UBASH3BQ8TF42 649 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 RHNO1Q9BSD3 238 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 EGLN1Q9GZT9 426 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 PBOV1Q9GZY1 135 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 INPP5EQ9NRR6 644 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 TMEM100Q9NV29 134 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 FAM206AQ9NX38 181 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 ZNF391Q9UJN7 358 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 SNX5Q9Y5X3 404 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 R4GMQ9 66 aa11.68□□□□□ -0.54
VPREB1-202ENST00000403807 PRRC2AP48634 2157 aaKnown RBP11.68□□□□□ -0.54
VPREB1-202ENST00000403807 ARID1AO14497 2285 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 ARFGEF3Q5TH69 2177 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 C5orf63A6NC05 138 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 ZSCAN5BA6NJL1 495 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 CD300LBA8K4G0 201 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 LY6HO94772 140 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 RPP14O95059 124 aaKnown RBP11.67□□□□□ -0.54
VPREB1-202ENST00000403807 IGHV1-46P01743 117 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 ADH4P08319 380 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 MAGEB1P43366 347 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 PDLIM4P50479 330 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 CCL8P80075 99 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 FAM3AP98173 230 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 GFOD2Q3B7J2 385 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 ZNF684Q5T5D7 378 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 LIPNQ5VXI9 398 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 IZUMO2Q6UXV1 221 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 FAM220AQ7Z4H9 259 aa11.67□□□□□ -0.54
VPREB1-202ENST00000403807 TGIF2LYQ8IUE0 185 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms