RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 LSM6P62312 80 aaKnown RBP9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 OR8B8Q15620 311 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 LY6EQ16553 131 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 KCNMB1Q16558 191 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 TBPL2Q6SJ96 375 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 METAP1DQ6UB28 335 aaPredicted RBP9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PTCHD4Q6ZW05 846 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 C11orf53Q8IXP5 236 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 OR5L1Q8NGL2 311 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ST8SIA4Q92187 359 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 RORBQ92753 470 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SLCO4A1Q96BD0 722 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 TSSK2Q96PF2 358 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 COQ7Q99807 217 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SYT4Q9H2B2 425 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ONECUT1Q9UBC0 465 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 RHCGQ9UBD6 479 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 KAAG1Q9UBP8 84 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ATPIF1Q9UII2 106 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ANKRD61A6NGH8 418 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 H3BUX3 64 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 J3KTA2 159 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 POLR3GO15318 223 aaPredicted RBP9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CHST1O43916 411 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 TFF1P04155 84 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CD14P08571 375 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 IGLL1P15814 213 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SAA4P35542 130 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 YAP1P46937 504 aaKnown RBP9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SLC9A3P48764 834 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PRKCDQ05655 676 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 HABP2Q14520 560 aaPredicted RBP9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ZBTB37Q5TC79 503 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 TEX36Q5VZQ5 186 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CFAP77Q6ZQR2 320 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 WDR86Q86TI4 376 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 GLB1L2Q8IW92 636 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 FAM216BQ8N7L0 139 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 FAM156AQ8NDB6 213 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PIFOQ8TCI5 191 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SLC26A7Q8TE54 656 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CCL13Q99616 98 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CCDC28BQ9BUN5 200 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 POLR2J2Q9GZM3 115 aaKnown RBP9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 NUAK2Q9H093 628 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 POLR2J3Q9H1A7 115 aaKnown RBP9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 RERGLQ9H628 205 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PNRC2Q9NPJ4 139 aaKnown RBP9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 C1orf123Q9NWV4 160 aa9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 V9GYY5 206 aaPredicted RBP9.69□□□□□ -0.86
SPTLC1P3-201ENST00000403408 TRAV38-1A0A0B4J264 116 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 A0A1B0GVI7 797 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 MEIOCA2RUB1 952 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CD300LBA8K4G0 201 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 VSIG10L2P0DP72 767 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CDKN2AP42771 156 aaKnown RBP9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 GPR4P46093 362 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 FXYD6P3P58550 94 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 OR8G1Q15617 311 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 RABL3Q5HYI8 236 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 WDR38Q5JTN6 314 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 WDR93Q6P2C0 686 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 OAFQ86UD1 273 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 OR5R1Q8NH85 324 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 HCAR1Q9BXC0 346 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PPP1R3EQ9H7J1 279 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 FN3KRPQ9HA64 309 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SERTAD4Q9NUC0 356 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 RPS6KA6Q9UK32 745 aa9.68□□□□□ -0.86
SPTLC1P3-201ENST00000403408 A0A087WUU8 490 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 BTBD17A6NE02 478 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 EFCAB9A8MZ26 197 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 FXYD1O00168 92 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ACOT8O14734 319 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 XPNPEP2O43895 674 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PTP4A3O75365 173 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 KHDRBS3O75525 346 aaKnown RBP9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PPP1R3DO95685 299 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ECDO95905 644 aaPredicted RBP9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PSKH1P11801 424 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ZNF92Q03936 586 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 KRR1Q13601 381 aaKnown RBP9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SNAI3Q3KNW1 292 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 NANOGP8Q6NSW7 305 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 LINC00346Q8IVM7 164 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 BEND2Q8NDZ0 799 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 WFDC9Q8NEX5 89 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 OR2AE1Q8NHA4 323 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 NPRL2Q8WTW4 380 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 R3HDM4Q96D70 268 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PRRC1Q96M27 445 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ZNF570Q96NI8 536 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CITED2Q99967 270 aaPredicted RBP9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ADAT1Q9BUB4 502 aaKnown RBP9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 HDHD2Q9H0R4 259 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ZNF702PQ9H963 129 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 NMNAT1Q9HAN9 279 aaPredicted RBP9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 GMPR2Q9P2T1 348 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms