RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 TMEM200CA6NKL6 621 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 BET1O15155 118 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 PATE4P0C8F1 98 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 CCL4P13236 92 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 CSRP1P21291 193 aaKnown RBP9.85□□□□□ -0.83
SCFD2-202ENST00000401642 LAP3P28838 519 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 EPHA4P54764 986 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 CLDN6P56747 220 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 IL13RA1P78552 427 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 ROM1Q03395 351 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 UNC119Q13432 240 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 RHBDD2Q6NTF9 364 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 CPEB2Q7Z5Q1 589 aaKnown RBP9.85□□□□□ -0.83
SCFD2-202ENST00000401642 ZNF441Q8N8Z8 693 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 OR10S1Q8NGN2 331 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 ZBTB8AQ96BR9 441 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 KCNK17Q96T54 332 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 CST11Q9H112 138 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 VSIG4Q9Y279 399 aa9.85□□□□□ -0.83
SCFD2-202ENST00000401642 EML6Q6ZMW3 1958 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 OR2M5A3KFT3 312 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 SOCS1O15524 211 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 SSX5O60225 188 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 PDGFBP01127 241 aaPredicted RBP9.84□□□□□ -0.83
SCFD2-202ENST00000401642 HOXD4P09016 255 aaPredicted RBP9.84□□□□□ -0.83
SCFD2-202ENST00000401642 VSIG8P0DPA2 414 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 GLI4P10075 376 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 CD96P40200 585 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 PPP1R1AQ13522 171 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 TMEM244Q5VVB8 128 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 PLXDC2Q6UX71 529 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 PPP1R3BQ86XI6 285 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 OR1M1Q8NGA1 313 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 MARCH1Q8TCQ1 289 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 C15orf40Q8WUR7 153 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 ROBO4Q8WZ75 1007 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 UCN2Q96RP3 112 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 ZNF275Q9NSD4 429 aaPredicted RBP9.84□□□□□ -0.83
SCFD2-202ENST00000401642 COMMD9Q9P000 198 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 PTRH2Q9Y3E5 179 aaKnown RBP9.84□□□□□ -0.83
SCFD2-202ENST00000401642 EP300Q09472 2414 aaPredicted RBP9.84□□□□□ -0.83
SCFD2-202ENST00000401642 LINC00862A6NCI5 91 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 WIPF3A6NGB9 483 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 A6NIZ1 184 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 TO15178 435 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 DBHP09172 617 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 RAB3AP20336 220 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 APOBEC1P41238 236 aaKnown RBP9.84□□□□□ -0.83
SCFD2-202ENST00000401642 LUMP51884 338 aaPredicted RBP9.84□□□□□ -0.83
SCFD2-202ENST00000401642 ATP1B3P54709 279 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 RAP1BP61224 184 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 RAP1AP62834 184 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 CLLU1Q5K131 121 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 TMEM71Q6P5X7 295 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 PIGTQ969N2 578 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 EMC3Q9P0I2 261 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 NPTNQ9Y639 398 aa9.84□□□□□ -0.83
SCFD2-202ENST00000401642 NCOA6Q14686 2063 aaPredicted RBP9.84□□□□□ -0.83
SCFD2-202ENST00000401642 IGHV5-10-1A0A0J9YXX1 117 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 SNRPGP15A8MWD9 76 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 ZFAND5O76080 213 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 APOC3P02656 99 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 ERCC1P07992 297 aaPredicted RBP9.83□□□□□ -0.84
SCFD2-202ENST00000401642 PNLIPP16233 465 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 GUCA1AP43080 201 aaPredicted RBP9.83□□□□□ -0.84
SCFD2-202ENST00000401642 STARP49675 285 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 SHBQ15464 509 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 NKAPLQ5M9Q1 402 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 BRICD5Q6PL45 260 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 SPICQ8N5J4 248 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 MFSD8Q8NHS3 518 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 POC1BQ8TC44 478 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 PNPLA2Q96AD5 504 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 PPA2Q9H2U2 334 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 B3GAT1Q9P2W7 334 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 SRPK3Q9UPE1 567 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 LHFPL6Q9Y693 200 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 OR5H14A6NHG9 310 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 STK17BO94768 372 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 IGHV3-9P01782 118 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 IL5P05113 134 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 SERPINA2P20848 420 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 RPS18P62269 152 aaKnown RBP9.83□□□□□ -0.84
SCFD2-202ENST00000401642 SCRN3Q0VDG4 424 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 TUSC1Q2TAM9 212 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 STPG2Q8N412 459 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 TMEM156Q8N614 296 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 ZNF454Q8N9F8 522 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 PLPP5Q8NEB5 264 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 NFAM1Q8NET5 270 aaPredicted RBP9.83□□□□□ -0.84
SCFD2-202ENST00000401642 OR5D14Q8NGL3 314 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 OR13C8Q8NGS7 320 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 INTS12Q96CB8 462 aaKnown RBP9.83□□□□□ -0.84
SCFD2-202ENST00000401642 RASL10BQ96S79 203 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 ZNF768Q9H5H4 540 aaKnown RBP9.83□□□□□ -0.84
SCFD2-202ENST00000401642 GAREM1Q9H706 876 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 GSKIPQ9P0R6 139 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 KCNK7Q9Y2U2 307 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 LOC400499M0QZD8 3231 aa9.83□□□□□ -0.84
SCFD2-202ENST00000401642 OR5H15A6NDH6 313 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms