RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 TRBV5-5A0A0J9YX44 114 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 TMEM212A6NML5 194 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 RER1O15258 196 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 ACAA1P09110 424 aaPredicted RBP13.36□□□□□ -0.27
COL25A1-201ENST00000399126 PMP22Q01453 160 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 AANATQ16613 207 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 PAMR1Q6UXH9 720 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 CATSPERDQ86XM0 798 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 TCTE3Q8IZS6 198 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 RNF133Q8WVZ7 376 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 TMEM106AQ96A25 262 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 SPACA1Q9HBV2 294 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 SLC22A5O76082 557 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 GLSO94925 669 aaPredicted RBP13.36□□□□□ -0.27
COL25A1-201ENST00000399126 EPXP11678 715 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 SNRPBP14678 240 aaKnown RBP13.36□□□□□ -0.27
COL25A1-201ENST00000399126 ADRA2CP18825 462 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 APEX1P27695 318 aaKnown RBP13.36□□□□□ -0.27
COL25A1-201ENST00000399126 GZMKP49863 264 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 CLDN18P56856 261 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 FDX2Q6P4F2 183 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 STX12Q86Y82 276 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 TMEM54Q969K7 222 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 NKX3-1Q99801 234 aaPredicted RBP13.36□□□□□ -0.27
COL25A1-201ENST00000399126 BCL2L14Q9BZR8 327 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 COMMD4Q9H0A8 199 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 FOXD3Q9UJU5 478 aaPredicted RBP13.36□□□□□ -0.27
COL25A1-201ENST00000399126 TLX3O43711 291 aaPredicted RBP13.36□□□□□ -0.27
COL25A1-201ENST00000399126 SSX4O60224 188 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 EIF4EP06730 217 aaKnown RBP13.36□□□□□ -0.27
COL25A1-201ENST00000399126 RRADP55042 308 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 CLDN12P56749 244 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 PPP3R1P63098 170 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 RASGEF1BQ0VAM2 473 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 ASPHD2Q6ICH7 369 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 SAMD12Q8N8I0 201 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 RBM24Q9BX46 236 aaKnown RBP13.36□□□□□ -0.27
COL25A1-201ENST00000399126 G6PC2Q9NQR9 355 aa13.36□□□□□ -0.27
COL25A1-201ENST00000399126 KLF13Q9Y2Y9 288 aaPredicted RBP13.36□□□□□ -0.27
COL25A1-201ENST00000399126 TMEM269A0A1B0GVZ9 245 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 MEIOCA2RUB1 952 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 H2BFMP0C1H6 154 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 PTBP1P26599 531 aaKnown RBP eCLIP13.35□□□□□ -0.27
COL25A1-201ENST00000399126 RPL35P42766 123 aaKnown RBP13.35□□□□□ -0.27
COL25A1-201ENST00000399126 AKR1D1P51857 326 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 PPIAP62937 165 aaKnown RBP13.35□□□□□ -0.27
COL25A1-201ENST00000399126 IKZF1Q13422 519 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 DEFB109BQ30KR1 87 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 ZNF766Q5HY98 468 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 HES5Q5TA89 166 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 ABLIM2Q6H8Q1 611 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 TRMT10AQ8TBZ6 339 aaKnown RBP13.35□□□□□ -0.27
COL25A1-201ENST00000399126 TSEN15Q8WW01 171 aaKnown RBP13.35□□□□□ -0.27
COL25A1-201ENST00000399126 ALKBH3Q96Q83 286 aaPredicted RBP13.35□□□□□ -0.27
COL25A1-201ENST00000399126 DEFB127Q9H1M4 99 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 SPATA2Q9UM82 520 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 R4GMQ9 66 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 RAB19A4D1S5 217 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 NUDT19A8MXV4 375 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 LMX1BO60663 402 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 SPINK2P20155 84 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 SOX8P57073 446 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 STAC2Q6ZMT1 411 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 COMMD7Q86VX2 200 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 LRRC18Q8N456 261 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 ZNF671Q8TAW3 534 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 GPR148Q8TDV2 347 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 C1orf198Q9H425 327 aa13.35□□□□□ -0.27
COL25A1-201ENST00000399126 HSPB2A8KAH6 182 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 GPR171O14626 319 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 DNPH1O43598 174 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 OPN1MWP04001 364 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 MAS1P04201 325 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 OPN1MW2P0DN77 364 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 OPN1MW3P0DN78 364 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 SLC2A1P11166 492 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 EVX1P49640 407 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 HSPB2Q16082 182 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 FCRLAQ7L513 359 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 LINGO2Q7L985 606 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.34□□□□□ -0.27
COL25A1-201ENST00000399126 HAS2Q92819 552 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 TINAGL1Q9GZM7 467 aaPredicted RBP13.34□□□□□ -0.27
COL25A1-201ENST00000399126 PIEZO2Q9H5I5 2752 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 TRBV5-7A0A0A0MS05 114 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 KLRC4-KLRK1H3BQV0 150 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 EFSO43281 561 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 TNFSF10P50591 281 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 CCR9P51686 369 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 TAB1Q15750 504 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 KRT74Q7RTS7 529 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 OR8H3Q8N146 312 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 ZFP62Q8NB50 900 aaPredicted RBP13.34□□□□□ -0.27
COL25A1-201ENST00000399126 HAVCR2Q8TDQ0 301 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 NABP1Q96AH0 204 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 SF3B5Q9BWJ5 86 aaKnown RBP13.34□□□□□ -0.27
COL25A1-201ENST00000399126 ULBP2Q9BZM5 246 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 PNRC2Q9NPJ4 139 aaKnown RBP13.34□□□□□ -0.27
COL25A1-201ENST00000399126 OR52A1Q9UKL2 312 aa13.34□□□□□ -0.27
COL25A1-201ENST00000399126 CIB4A0PJX0 185 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms