RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ZNF586Q9NXT0 402 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 HS3ST1O14792 307 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 GALR2O43603 387 aaPredicted RBP7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 SSSCA1O60232 199 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 SRFP11831 508 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 UBE2IP63279 158 aaKnown RBP7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 AANATQ16613 207 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 HYAL4Q2M3T9 481 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 TRIM61Q5EBN2 209 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 CLLU1Q5K131 121 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 TMPRSS11FQ6ZWK6 438 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 RTN4RL1Q86UN2 441 aaPredicted RBP7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 BAP18Q8IXM2 172 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 SCCPDHQ8NBX0 429 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 NPEPL1Q8NDH3 523 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 OR5M8Q8NGP6 311 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 RLN3Q8WXF3 142 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 APOBEC3DQ96AK3 386 aaPredicted RBP7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 MRPS24Q96EL2 167 aaKnown RBP7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 PHYHIPLQ96FC7 376 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 BANF2Q9H503 90 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 ZNF576Q9H609 170 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 B9D1Q9UPM9 204 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 POMT1Q9Y6A1 747 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 KCNE1BA0A087WTH5 132 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 K7ESM1 405 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 CYTIPO60759 359 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 ZNF90Q03938 601 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 OR8G2PQ6IF36 304 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 GDF2Q9UK05 429 aaPredicted RBP7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 COL18A1P39060 1754 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 A0A087WUJ7 227 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 A0A1W2PPC4 97 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 GPR31O00270 319 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 CTDSPLO15194 276 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 NUPL2O15504 423 aaKnown RBP7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 CNIH1O95406 144 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 GALNSP34059 522 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 TMEM128Q5BJH2 165 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 ETFRF1Q6IPR1 90 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 TCTN3Q6NUS6 607 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 VHLLQ6RSH7 139 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 ZNF687Q8N1G0 1237 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 KLHDC1Q8N7A1 406 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 TEX19Q8NA77 164 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 C16orf52Q8NHV5 167 aa7.57□□□□□ -1.2
SPTLC3-201ENST00000399002 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 OR6C68A6NDL8 312 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 ELLP55199 621 aaPredicted RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 TMEM268Q5VZI3 342 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 DEGS2Q6QHC5 323 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 PARM1Q6UWI2 310 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 SIGLECL1Q8N7X8 197 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 OR4F5Q8NH21 305 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 OTOSQ8NHW6 89 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 ST8SIA4Q92187 359 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 TMEM18Q96B42 140 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 OR4F4Q96R69 305 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 C6orf106Q9H6K1 298 aaPredicted RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 C12orf49Q9H741 205 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 HCSTQ9UBK5 93 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 RAB27BO00194 218 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 PRRG2O14669 202 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 LRP3O75074 770 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 SIX6O95475 246 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 HRH1P35367 487 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 TPPP2P59282 170 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 RNPS1Q15287 305 aaKnown RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 NEIL1Q96FI4 390 aaPredicted RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 GNB4Q9HAV0 340 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 SIRT5Q9NXA8 310 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 ZNF107Q9UII5 783 aaPredicted RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 RCL1Q9Y2P8 373 aaKnown RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 AKAP11Q9UKA4 1901 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 IGLV3-16A0A075B6K0 115 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 A0A0B4J2E0 115 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 A0A1B0GX12 115 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 TMEM30CPA0ZSE6 113 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 IDSB3KWA1 339 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 MAGEB4O15481 346 aaPredicted RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 NME2P1O60361 137 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 SLC2A10O95528 541 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 APEHP13798 732 aaKnown RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 PJVKQ0ZLH3 352 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 ZNF718Q3SXZ3 478 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 SOWAHCQ53LP3 525 aaPredicted RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 C11orf87Q6NUJ2 197 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 SSX9Q7RTT3 188 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 LILRA3Q8N6C8 439 aaPredicted RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 CADM4Q8NFZ8 388 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 OR5AP2Q8NGF4 316 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 OR2G2Q8NGZ5 317 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 OR8B4Q96RC9 309 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 CRLF2Q9HC73 371 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 KIF13BQ9NQT8 1826 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 J3QR89 54 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 SBK3P0C264 359 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 PGA3P0DJD8 388 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 CLPPQ16740 277 aaPredicted RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 FAHD2BQ6P2I3 314 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms