RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 C17orf105B2RV13 164 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 OR6A2O95222 327 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 WISP1O95388 367 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 HTR2CP28335 458 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 HOXA6P31267 233 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 CDX1P47902 265 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 OR2B8PP59922 312 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 TOMM34Q15785 309 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 PRTGQ2VWP7 1150 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 ADAM5Q6NVV9 412 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 C1QL4Q86Z23 238 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 TMEM229BQ8NBD8 167 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 OR51A2Q8NGJ7 313 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 GPBAR1Q8TDU6 330 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 CCNL2Q96S94 520 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 CHST5Q9GZS9 411 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 ADAM19Q9H013 955 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 SLC16A7O60669 478 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 AKT2P31751 481 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 TGIF1Q15583 401 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 MOGAT2Q3SYC2 334 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 FAM166AQ6J272 317 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 FAM160A2Q8N612 972 aaPredicted RBP14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 METTL21AQ8WXB1 218 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 DCUN1D4Q92564 292 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 ISOC2Q96AB3 205 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 S100PBPQ96BU1 408 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 KIRREL1Q96J84 757 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 NEU1Q99519 415 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 CMKLR1Q99788 373 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 PNO1Q9NRX1 252 aaKnown RBP14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 PRODH2Q9UF12 536 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 B9D1Q9UPM9 204 aa14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 TMEM184BQ9Y519 407 aaPredicted RBP14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 MRPS18BQ9Y676 258 aaKnown RBP14.28□□□□□ -0.12
CHMP1A-201ENST00000397901 C7orf77A4D0Y5 90 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 FAM157AC9JC47 383 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 HCRTR2O43614 444 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 CYB5AP00167 134 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 SNRNP70P08621 437 aaKnown RBP14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 FCGR3AP08637 254 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 HIST1H1BP16401 226 aaKnown RBP14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 PSMB6P28072 239 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 CD80P33681 288 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 PPM1FP49593 454 aaPredicted RBP14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 GSK3AP49840 483 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 DVL1P1P54792 670 aaPredicted RBP14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 SPOCK1Q08629 439 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 BIKQ13323 160 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 AWAT1Q58HT5 328 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 LYG2Q86SG7 212 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 ZNF679Q8IYX0 411 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 BPIFB2Q8N4F0 458 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 OR4S1Q8NGB4 309 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 ASB5Q8WWX0 329 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 NKD1Q969G9 470 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 AKR1E2Q96JD6 320 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 SLC41A2Q96JW4 573 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 C2orf88Q9BSF0 95 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 PARPBPQ9NWS1 579 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 MRPL22Q9NWU5 206 aaKnown RBP14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 CKLFQ9UBR5 152 aa14.27□□□□□ -0.12
CHMP1A-201ENST00000397901 CDC14CA4D256 554 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 FITM1A5D6W6 292 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 B4DGG1 531 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 ZNF736B4DX44 427 aaPredicted RBP14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 NUDT14O95848 222 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 CXCR1P25024 350 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 CFPP27918 469 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 NSUN5P2Q63ZY6 315 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 SLC18B1Q6NT16 456 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 JAGN1Q8N5M9 183 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 ADAMTS17Q8TE56 1095 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 RNF128Q8TEB7 428 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 OR5B2Q96R09 309 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 SLC17A5Q9NRA2 495 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 GAR1Q9NY12 217 aaKnown RBP14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 CSAG2Q9Y5P2 127 aa14.27□□□□□ -0.13
CHMP1A-201ENST00000397901 TRBV6-7A0A0A0MS04 114 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 KIR2DS5A0A0G2JLQ3 304 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 A0A0G2JNG1 304 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 TMEM235A6NFC5 223 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 C10orf142B7Z368 130 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 C9JQL5 133 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 KIR2DS3K7RE56 304 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 KCNAB3O43448 404 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 IFNA2P01563 188 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 SLC2A1P11166 492 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 NME2P22392 152 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 ZBTB25P24278 435 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 PPICP45877 212 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 ADAM8P78325 824 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 ZNF117Q03924 483 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 KIR2DS5Q14953 304 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 ACKR1Q16570 336 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 DNLZQ5SXM8 178 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 CD163Q86VB7 1156 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 SLC25A44Q96H78 314 aaPredicted RBP14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 GAL3ST4Q96RP7 486 aa14.26□□□□□ -0.13
CHMP1A-201ENST00000397901 SLC6A7Q99884 636 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms