RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 HOXB1P14653 301 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF14P17017 642 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-204ENST00000396548 C11orf91Q3C1V1 193 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 OR52H1Q8NGJ2 320 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 SPSB4Q96A44 273 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 SFXN3Q9BWM7 321 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 TAS2R4Q9NYW5 299 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 PROCRQ9UNN8 238 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 LOC390937A0A1W2PQ73 354 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 IFITM5A6NNB3 132 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 AIPO00170 330 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF474Q6S9Z5 364 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-204ENST00000396548 C3P1Q6ZMU1 363 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 DOK3Q7L591 496 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 PGAM5Q96HS1 289 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 TCF7L1Q9HCS4 588 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF846Q147U1 533 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 IDNKQ5T6J7 187 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 TMEM53Q6P2H8 277 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 CCDC36Q8IYA8 594 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 SSC4DQ8WTU2 575 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 FGGYQ96C11 551 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 SDHCQ99643 169 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-204ENST00000396548 WDR12Q9GZL7 423 aaKnown RBP11.04□□□□□ -0.64
TRIM39-204ENST00000396548 RNF121Q9H920 327 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 V9GY05 133 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 ICMTO60725 284 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 LYZL6O75951 148 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 IL2RAP01589 272 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 STOMP27105 288 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 GSG1Q2KHT4 349 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 KRT74Q7RTS7 529 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 MDP1Q86V88 176 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 MYPOPQ86VE0 399 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-204ENST00000396548 SLC25A28Q96A46 364 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 PLGRKTQ9HBL7 147 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 DAPK2Q9UIK4 370 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 TINAGQ9UJW2 476 aa11.04□□□□□ -0.64
TRIM39-204ENST00000396548 A0A0G2JNJ9 132 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 PRRG2O14669 202 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 CD79AP11912 226 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 P2RY6Q15077 328 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 GLYATL3Q5SZD4 288 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 CRIP3Q6Q6R5 217 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 CXorf67Q86X51 503 aaPredicted RBP11.03□□□□□ -0.64
TRIM39-204ENST00000396548 SERPINA12Q8IW75 414 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 CCDC54Q8NEL0 328 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 DNAAF1Q8NEP3 725 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 OR51A2Q8NGJ7 313 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 HMG20AQ9NP66 347 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 JKAMPQ9P055 326 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 Q9UFV3 132 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 SHANK1Q9Y566 2161 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 A0A1B0GVI7 797 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 HPGDSO60760 199 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 MAS1P04201 325 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 SLC6A9P48067 706 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 PPP3R1P63098 170 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF45Q02386 682 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 TSC22D1Q15714 1073 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 DMRTA2Q96SC8 542 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 OR10A2Q9H208 303 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 ABRACLQ9P1F3 81 aa11.03□□□□□ -0.64
TRIM39-204ENST00000396548 INTS1Q8N201 2190 aaKnown RBP11.02□□□□□ -0.64
TRIM39-204ENST00000396548 A0A0B4J203 849 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 DHRS7CA6NNS2 312 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 J3QRK9 145 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 RAD51DO75771 328 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 DHRS3O75911 302 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 SERPINA5P05154 406 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 CD2P06729 351 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF12P17014 697 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 S100A5P33763 92 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 PER3P56645 1201 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 TGFBR3Q03167 851 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF79Q15937 498 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 BEND4Q6ZU67 534 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 C17orf78Q8N4C9 275 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 PAQR4Q8N4S7 273 aaPredicted RBP11.02□□□□□ -0.64
TRIM39-204ENST00000396548 OR5H6Q8NGV6 325 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 SLITRK2Q9H156 845 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 COMMD3Q9UBI1 195 aa11.02□□□□□ -0.64
TRIM39-204ENST00000396548 PAHP00439 452 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 SFTPCP11686 197 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 EVX1P49640 407 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 DDI2Q5TDH0 399 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 OR5AS1Q8N127 324 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 BORCS5Q969J3 196 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 C10orf35Q96D05 121 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 ZNF391Q9UJN7 358 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 hCG_38984A0A1B0GV85 526 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 ERVH48-1M5A8F1 160 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 ALX3O95076 343 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 IGKV3-15P01624 115 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 CD40LGP29965 261 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 WNT5AP41221 380 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 PPP5CP53041 499 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 IFITM3Q01628 133 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 PMPCAQ10713 525 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 MZT2AQ6P582 158 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms