RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 TNFSF18Q9UNG2 199 aa12.53□□□□□ -0.4
CCHCR1-203ENST00000396268 R4GMQ9 66 aa12.53□□□□□ -0.4
CCHCR1-203ENST00000396268 LOC101059948A0A1B0GTJ6 334 aa12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 H0YIG0 161 aa12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 CD8AP01732 235 aa12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 ACAA1P09110 424 aaPredicted RBP12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 AKR1C4P17516 323 aa12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 IGFBP3P17936 291 aaPredicted RBP12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 IL11P20809 199 aa12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 PRKXP51817 358 aa12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 POLR2GP62487 172 aaKnown RBP eCLIP12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 ZNF248Q8NDW4 579 aa12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 FAM117AQ9C073 453 aa12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 MBD2Q9UBB5 411 aa12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 ZNF629Q9UEG4 869 aaPredicted RBP12.52□□□□□ -0.4
CCHCR1-203ENST00000396268 RNF222A6NCQ9 220 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 TTLL8A6PVC2 850 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 PATE3B3GLJ2 98 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 BCL2L11O43521 198 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 OR2F2O95006 317 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 DDAH2O95865 285 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 PTGFRP43088 359 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 POLR2HP52434 150 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 OR2F1Q13607 317 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 NSDHLQ15738 373 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 LPAL2Q16609 132 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 C14orf28Q4W4Y0 310 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 VWA2Q5GFL6 755 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 NUP54Q7Z3B4 507 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 C17orf82Q86X59 251 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 C9orf40Q8IXQ3 194 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 GPR119Q8TDV5 335 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 ZNF721Q8TF20 911 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 EDAQ92838 391 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 PRRT1Q99946 306 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 PCED1AQ9H1Q7 454 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 NIT2Q9NQR4 276 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 CUTCQ9NTM9 273 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 VSX1Q9NZR4 365 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 RTTNQ86VV8 2226 aa12.52□□□□□ -0.41
CCHCR1-203ENST00000396268 A0A1B0GTI1 187 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 C2orf72A6NCS6 295 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 C5orf51A6NDU8 294 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 RHPN2P1A8MT19 583 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 A8MVM7 634 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 CRABP1P29762 137 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 RFC3P40938 356 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 EBPQ15125 230 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 TMPPEQ6ZT21 453 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 TMPRSS9Q7Z410 1059 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 INO80EQ8NBZ0 244 aaPredicted RBP12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 NUBPLQ8TB37 319 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 FGGYQ96C11 551 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 GDF2Q9UK05 429 aaPredicted RBP12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 ATXN7L1Q9ULK2 861 aaPredicted RBP12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 ALG1L2C9J202 215 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 PLPP3O14495 311 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 CD74P04233 296 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 IGKV3-11P04433 115 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 TDGF1P13385 188 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 PGAM2P15259 253 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 FSTP19883 344 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 GALNSP34059 522 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 MEF2DQ14814 521 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 LYSMD4Q5XG99 296 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 LPCAT3Q6P1A2 487 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 ACOT7LQ6ZUV0 252 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 ROBO4Q8WZ75 1007 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 PIGMQ9H3S5 423 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 GAREM1Q9H706 876 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 CNTD2Q9H8S5 307 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 DXOO77932 396 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 STK17BO94768 372 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 HRH1P35367 487 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 CASRP41180 1078 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 GABRA4P48169 554 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 ARRB1P49407 418 aaPredicted RBP12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 OGFOD3Q6PK18 319 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 LYG2Q86SG7 212 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 CCDC36Q8IYA8 594 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 GLYATL2Q8WU03 294 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 PHB2Q99623 299 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 EDEM2Q9BV94 578 aa12.51□□□□□ -0.41
CCHCR1-203ENST00000396268 TXNL1O43396 289 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 IFNA6P05013 189 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 FABP1P07148 127 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 H2BFMP0C1H6 154 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 ABCD3P28288 659 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 CD96P40200 585 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 OR1M1Q8NGA1 313 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 ELP5Q8TE02 316 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 SPSB2Q99619 263 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 PARP12Q9H0J9 701 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 G6PC2Q9NQR9 355 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 COPS7AQ9UBW8 275 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 MEX3AA1L020 520 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 NPIPA5E9PKD4 350 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 ERCC1P07992 297 aaPredicted RBP12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 GNB3P16520 340 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 ZBTB25P24278 435 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms