RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 NAA40Q86UY6 237 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 OR51D1Q8NGF3 324 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 RXFP3Q9NSD7 469 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 FAM206AQ9NX38 181 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 ASH2LQ9UBL3 628 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 NDRG3Q9UGV2 375 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 KLF7O75840 302 aaPredicted RBP9.13□□□□□ -0.95
HIF1A-203ENST00000394997 RAB6AP20340 208 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 DNASE1L1P49184 302 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 NR0B1P51843 470 aaKnown RBP9.13□□□□□ -0.95
HIF1A-203ENST00000394997 SLC17A1Q14916 467 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 PDZD11Q5EBL8 140 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 FAM69BQ5VUD6 431 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 OR1S2Q8NGQ3 325 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 OR8D2Q9GZM6 311 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 SDK2Q58EX2 2172 aa9.13□□□□□ -0.95
HIF1A-203ENST00000394997 TMED7-TICAM2A0A0A6YYA0 188 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 TMEM82A0PJX8 343 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 MFSD2BA6NFX1 497 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 BCAT2O15382 392 aaPredicted RBP9.12□□□□□ -0.95
HIF1A-203ENST00000394997 LY86O95711 162 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 PGAM2P15259 253 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 ZNF28P17035 718 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 CPT2P23786 658 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 GUCA2AQ02747 115 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 MEP1BQ16820 701 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 RSPO1Q2MKA7 263 aaPredicted RBP9.12□□□□□ -0.95
HIF1A-203ENST00000394997 C2orf68Q2NKX9 166 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 FOXL2NBQ6ZUU3 175 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 STT3BQ8TCJ2 826 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 HLA-CQ95604 372 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 KLHL15Q96M94 604 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 SMIM3Q9BZL3 60 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 C1orf198Q9H425 327 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 APMAPQ9HDC9 416 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 FBXO4Q9UKT5 387 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 ATXN7L1Q9ULK2 861 aaPredicted RBP9.12□□□□□ -0.95
HIF1A-203ENST00000394997 ANAPC10Q9UM13 185 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 TMED7Q9Y3B3 224 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 CACNA1AO00555 2505 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 GABARAPH6UMI1 98 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 SCDO00767 359 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 GLSO94925 669 aaPredicted RBP9.12□□□□□ -0.95
HIF1A-203ENST00000394997 AKAIN1P0CW23 69 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 POLR2HP52434 150 aaKnown RBP9.12□□□□□ -0.95
HIF1A-203ENST00000394997 CXADRP78310 365 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 PCOLCEQ15113 449 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 C1orf140Q5VVS0 124 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 PMS2CLQ68D20 193 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 GLDNQ6ZMI3 551 aaPredicted RBP9.12□□□□□ -0.95
HIF1A-203ENST00000394997 DBX2Q6ZNG2 339 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 DPY19L4Q7Z388 723 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 TMEM200AQ86VY9 491 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 SFT2D1Q8WV19 159 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 ZBTB8AQ96BR9 441 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 ULBP3Q9BZM4 244 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 FGF21Q9NSA1 209 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 FAM96BQ9Y3D0 163 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 MRPS18BQ9Y676 258 aaKnown RBP9.12□□□□□ -0.95
HIF1A-203ENST00000394997 TMEM272A0A1B0GTI8 110 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 ZNF208O43345 1280 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 HIST1H2ABP04908 130 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 TACSTD2P09758 323 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 FBLP22087 321 aaKnown RBP9.12□□□□□ -0.95
HIF1A-203ENST00000394997 NME2P22392 152 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 GUCA2BQ16661 112 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 RNASE10Q5GAN6 216 aaKnown RBP9.12□□□□□ -0.95
HIF1A-203ENST00000394997 HIST3H2AQ7L7L0 130 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 SSX9Q7RTT3 188 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 GRINAQ7Z429 371 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 ZNF584Q8IVC4 421 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 HIST1H2ACQ93077 130 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 DCBLD2Q96PD2 775 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 SPRY4Q9C004 299 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 LIPT2A6NK58 231 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 LINC00587B1AMM8 73 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 RAMP1O60894 148 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 CTAG2O75638 210 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 NQO2P16083 231 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 CNR1P21554 472 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 IL13RA1P78552 427 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 ZFP36L1Q07352 338 aaKnown RBP9.12□□□□□ -0.95
HIF1A-203ENST00000394997 KRTAP27-1Q3LI81 207 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 TRIM61Q5EBN2 209 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 NKAPLQ5M9Q1 402 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 RGS7BPQ6MZT1 257 aaPredicted RBP9.12□□□□□ -0.95
HIF1A-203ENST00000394997 ARMC6Q6NXE6 501 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 RABEPKQ7Z6M1 372 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 RNASE11Q8TAA1 199 aaKnown RBP9.12□□□□□ -0.95
HIF1A-203ENST00000394997 PIGMQ9H3S5 423 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 LAMP5Q9UJQ1 280 aa9.12□□□□□ -0.95
HIF1A-203ENST00000394997 ARHGAP21Q5T5U3 1957 aa9.11□□□□□ -0.95
HIF1A-203ENST00000394997 ICE1Q9Y2F5 2266 aa9.11□□□□□ -0.95
HIF1A-203ENST00000394997 GGT3PA6NGU5 568 aa9.11□□□□□ -0.95
HIF1A-203ENST00000394997 SULT1C2O00338 296 aa9.11□□□□□ -0.95
HIF1A-203ENST00000394997 SERPINA5P05154 406 aa9.11□□□□□ -0.95
HIF1A-203ENST00000394997 CFIP05156 583 aa9.11□□□□□ -0.95
HIF1A-203ENST00000394997 VSIG10L2P0DP72 767 aa9.11□□□□□ -0.95
HIF1A-203ENST00000394997 DAZAP2Q15038 168 aaPredicted RBP9.11□□□□□ -0.95
HIF1A-203ENST00000394997 EIF2S3LQ2VIR3 472 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms