RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ZNF91Q05481 1191 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 HNRNPA0Q13151 305 aaKnown RBP16.95■□□□□ 0.3
SNCA-203ENST00000394986 TMED1Q13445 227 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 SPRNQ5BIV9 151 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 ZNF691Q5VV52 312 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 ZNF679Q8IYX0 411 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 DHRSXQ8N5I4 330 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 MAPK1IP1LQ8NDC0 245 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 C10orf105Q8TEF2 133 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 FAM168AQ92567 244 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 PGAM5Q96HS1 289 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 MNTQ99583 582 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 ADI1Q9BV57 179 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 MROQ9BYG7 248 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 CYSLTR2Q9NS75 346 aa16.95■□□□□ 0.3
SNCA-203ENST00000394986 F8P00451 2351 aa16.94■□□□□ 0.3
SNCA-203ENST00000394986 RNF223E7ERA6 249 aa16.94■□□□□ 0.3
SNCA-203ENST00000394986 SMAD7O15105 426 aaKnown RBP16.94■□□□□ 0.3
SNCA-203ENST00000394986 MPZL2O60487 215 aa16.94■□□□□ 0.3
SNCA-203ENST00000394986 APOC1P02654 83 aa16.94■□□□□ 0.3
SNCA-203ENST00000394986 CD99P14209 185 aa16.94■□□□□ 0.3
SNCA-203ENST00000394986 PDLIM4P50479 330 aa16.94■□□□□ 0.3
SNCA-203ENST00000394986 SMN1Q16637 294 aaKnown RBP16.94■□□□□ 0.3
SNCA-203ENST00000394986 OR2Z1Q8NG97 314 aa16.94■□□□□ 0.3
SNCA-203ENST00000394986 CNIH3Q8TBE1 160 aa16.94■□□□□ 0.3
SNCA-203ENST00000394986 UBASH3BQ8TF42 649 aa16.94■□□□□ 0.3
SNCA-203ENST00000394986 RHNO1Q9BSD3 238 aa16.94■□□□□ 0.3
SNCA-203ENST00000394986 DLL4Q9NR61 685 aa16.94■□□□□ 0.3
SNCA-203ENST00000394986 CGGBP1Q9UFW8 167 aaPredicted RBP16.94■□□□□ 0.3
SNCA-203ENST00000394986 MRM2Q9UI43 246 aaKnown RBP16.94■□□□□ 0.3
SNCA-203ENST00000394986 IQCF6A8MYZ5 107 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 PHYHO14832 338 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 TPD52L2O43399 206 aaKnown RBP16.93■□□□□ 0.3
SNCA-203ENST00000394986 WBP4O75554 376 aaKnown RBP16.93■□□□□ 0.3
SNCA-203ENST00000394986 GNAO1P09471 354 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 OR2T7P0C7T2 308 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 DBTP11182 482 aaKnown RBP16.93■□□□□ 0.3
SNCA-203ENST00000394986 COL8A2P25067 703 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 CAPGP40121 348 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 RIDAP52758 137 aaKnown RBP16.93■□□□□ 0.3
SNCA-203ENST00000394986 MFGE8Q08431 387 aaPredicted RBP16.93■□□□□ 0.3
SNCA-203ENST00000394986 CDK5R2Q13319 367 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 TIGD6Q17RP2 521 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 PCGF3Q3KNV8 242 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 TTC23Q5W5X9 447 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 DEGS2Q6QHC5 323 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 OR8G5Q8NG78 346 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 OR10AD1Q8NGE0 317 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 OR2T27Q8NH04 317 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 YIPF5Q969M3 257 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 SGK3Q96BR1 496 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 LGALS12Q96DT0 336 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 ELMOD3Q96FG2 381 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 REEP6Q96HR9 211 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 REPIN1Q9BWE0 567 aaKnown RBP16.93■□□□□ 0.3
SNCA-203ENST00000394986 VCXQ9H320 206 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 NIPAL2Q9H841 368 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 FAM206AQ9NX38 181 aa16.93■□□□□ 0.3
SNCA-203ENST00000394986 CD300LBA8K4G0 201 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 H0YL77 283 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 XRCC2O43543 280 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 CDC14BO60729 498 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 SELEP16581 610 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 RBMXP38159 391 aaKnown RBP16.92■□□□□ 0.3
SNCA-203ENST00000394986 LIPAP38571 399 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 ZNF85Q03923 595 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 ZMAT1Q5H9K5 638 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 OR8B12Q8NGG6 310 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 Q96MT0 163 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 OR10A2Q9H208 303 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 SAP30LQ9HAJ7 183 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 DECR2Q9NUI1 292 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 NKIRAS2Q9NYR9 191 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 TREM2Q9NZC2 230 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 CACNG2Q9Y698 323 aa16.92■□□□□ 0.3
SNCA-203ENST00000394986 ACANP16112 2415 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 TMEM269A0A1B0GVZ9 245 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 GGT3PA6NGU5 568 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 SNTNA6NMZ2 147 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 J3QRE1 110 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 MLNRO43193 412 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 ZNF254O75437 659 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 PNPP00491 289 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 ADH4P08319 380 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 CSF3P09919 207 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 AQP4P55087 323 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 DSCR9P59020 149 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 TNFAIP6P98066 277 aaPredicted RBP16.91■□□□□ 0.3
SNCA-203ENST00000394986 EGR3Q06889 387 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 FAM209AQ5JX71 171 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 ZNF786Q8N393 782 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 OR56B2PQ8NGI1 322 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 OR52H1Q8NGJ2 320 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 SPRYD4Q8WW59 207 aaPredicted RBP16.91■□□□□ 0.3
SNCA-203ENST00000394986 RDH5Q92781 318 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 PPP1R14AQ96A00 147 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 SPSB4Q96A44 273 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 COX4I2Q96KJ9 171 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 PIMREGQ9BSJ6 248 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 SOX7Q9BT81 388 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms