RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 AWAT2Q6E213 333 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 PTCRAQ6ISU1 281 aaPredicted RBP16.73■□□□□ 0.27
CBX1-202ENST00000393408 KCTD9Q7L273 389 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 ANGPTL5Q86XS5 388 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 THAP3Q8WTV1 239 aaPredicted RBP16.73■□□□□ 0.27
CBX1-202ENST00000393408 ZNF501Q96CX3 271 aaPredicted RBP16.73■□□□□ 0.27
CBX1-202ENST00000393408 MRPL13Q9BYD1 178 aaKnown RBP16.73■□□□□ 0.27
CBX1-202ENST00000393408 FAM117AQ9C073 453 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 B3GAT1Q9P2W7 334 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 B3GALT5Q9Y2C3 310 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 ADAMTS20P59510 1910 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 ADAMTS9Q9P2N4 1935 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 A0A1W2PNV4 684 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 DBX1A6NMT0 343 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 SHISA8B8ZZ34 492 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 H3BML4 177 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 TSPAN9O75954 239 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 PMP2P02689 132 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 IFNA6P05013 189 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 LAP3P28838 519 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 ZNF93P35789 620 aaPredicted RBP16.72■□□□□ 0.27
CBX1-202ENST00000393408 RNF144BQ7Z419 303 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 HOGA1Q86XE5 327 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 INO80EQ8NBZ0 244 aaPredicted RBP16.72■□□□□ 0.27
CBX1-202ENST00000393408 NICN1Q9BSH3 213 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 VSTM2BA6NLU5 285 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 EEF1E1-BLOC1S5C9J1V9 151 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 EFNA2O43921 213 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 MC2RQ01718 297 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 TMEM185AQ8NFB2 350 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 ARPC5LQ9BPX5 153 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 NUDT22Q9BRQ3 303 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 LPAR5Q9H1C0 372 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 FGF21Q9NSA1 209 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 PISDQ9UG56 409 aa16.72■□□□□ 0.27
CBX1-202ENST00000393408 F5H0A9 414 aaPredicted RBP16.71■□□□□ 0.27
CBX1-202ENST00000393408 PIAS2O75928 621 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 EMP2P54851 167 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 FOXK1P85037 733 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 DEFA5Q01523 94 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 NFAM1Q8NET5 270 aaPredicted RBP16.71■□□□□ 0.27
CBX1-202ENST00000393408 OR2I1PQ8NGU4 316 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 OR51E1Q8TCB6 317 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 STT3BQ8TCJ2 826 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 MARCH1Q8TCQ1 289 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 PIGMQ9H3S5 423 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 ATXN7L1Q9ULK2 861 aaPredicted RBP16.71■□□□□ 0.27
CBX1-202ENST00000393408 RPH3AQ9Y2J0 694 aaPredicted RBP16.71■□□□□ 0.27
CBX1-202ENST00000393408 LHFPL6Q9Y693 200 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 TRIOO75962 3097 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 A0A0A6YYD4 124 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 MPTX1A8MV57 137 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 ETV2O00321 342 aaPredicted RBP16.71■□□□□ 0.27
CBX1-202ENST00000393408 CRHP06850 196 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 OR4K15Q8NH41 348 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 ANAPC10Q9UM13 185 aa16.71■□□□□ 0.27
CBX1-202ENST00000393408 CHRM2P08172 466 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 ZNF20P17024 532 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 PSMB6P28072 239 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 TAS2R31P59538 309 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 THEM4Q5T1C6 240 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 ZNF101Q8IZC7 436 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 OR5AS1Q8N127 324 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 ZC3H10Q96K80 434 aaKnown RBP16.7■□□□□ 0.26
CBX1-202ENST00000393408 C1orf147Q96MC9 270 aaPredicted RBP16.7■□□□□ 0.26
CBX1-202ENST00000393408 SPACA5Q96QH8 159 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 TGIF2Q9GZN2 237 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 MOB1AQ9H8S9 216 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 SERPINF1P36955 418 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 ANKRD37Q7Z713 158 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 CCDC36Q8IYA8 594 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 TMEM104Q8NE00 496 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 OR5AP2Q8NGF4 316 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 OR1S2Q8NGQ3 325 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 RNF138Q8WVD3 245 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 LMAN1LQ9HAT1 526 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 CHMP1AQ9HD42 196 aaPredicted RBP16.7■□□□□ 0.26
CBX1-202ENST00000393408 SPAG17Q6Q759 2223 aa16.7■□□□□ 0.26
CBX1-202ENST00000393408 C5orf51A6NDU8 294 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 FAM74A7A6NL05 159 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 KCNAB3O43448 404 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 ABOP16442 354 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 NAT1P18440 290 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 BCKDHBP21953 392 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 MYBPHQ13203 477 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 MICBQ29980 383 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 FAM74A3Q4VXF1 159 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 PLAC9Q5JTB6 97 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 UQCC3Q6UW78 93 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 GLIPR1L1Q6UWM5 242 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 STOML3Q8TAV4 291 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 NUBPLQ8TB37 319 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 MARC2Q969Z3 335 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 PCDHB10Q9UN67 800 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 MRPS28Q9Y2Q9 187 aaKnown RBP16.69■□□□□ 0.26
CBX1-202ENST00000393408 CSAG2Q9Y5P2 127 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 TRBV6-7A0A0A0MS04 114 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 ZNF878C9JN71 531 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 F8VVB4 439 aa16.69■□□□□ 0.26
CBX1-202ENST00000393408 F8VWA3 439 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms