RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 PILRAQ9UKJ1 303 aa14.87□□□□□ -0.03
SCN3B-202ENST00000392770 POLDIP2Q9Y2S7 368 aa14.87□□□□□ -0.03
SCN3B-202ENST00000392770 FBXO24O75426 580 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 OMGP23515 440 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 ZNF573Q86YE8 665 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 SLIRPQ9GZT3 109 aaKnown RBP14.86□□□□□ -0.03
SCN3B-202ENST00000392770 PDCD11Q14690 1871 aaKnown RBP14.86□□□□□ -0.03
SCN3B-202ENST00000392770 TCRBV16S1A1N1A0A5B0 115 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 SPRY1O43609 319 aaPredicted RBP14.86□□□□□ -0.03
SCN3B-202ENST00000392770 THBS4P35443 961 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 RFX2P48378 723 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 PRSS53Q2L4Q9 553 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 B3GNTL1Q67FW5 361 aaPredicted RBP14.86□□□□□ -0.03
SCN3B-202ENST00000392770 JMJD6Q6NYC1 403 aaPredicted RBP14.86□□□□□ -0.03
SCN3B-202ENST00000392770 OR10R2Q8NGX6 335 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 ASB10Q8WXI3 467 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 MAFIPQ8WZ33 124 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 SLC7A6Q92536 515 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 ATP23Q9Y6H3 246 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 CT45A8P0DMV1 189 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 CT45A9P0DMV2 189 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 HOXD12P35452 270 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 SKP2Q13309 424 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 CT45A2Q5DJT8 189 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 SPINK14Q6IE38 97 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 CCDC190Q86UF4 302 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 C9orf40Q8IXQ3 194 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 OR10D3Q8NH80 312 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 OR5B12Q96R08 314 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 PRMT8Q9NR22 394 aaPredicted RBP14.86□□□□□ -0.03
SCN3B-202ENST00000392770 FLVCR2Q9UPI3 526 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 SH2D1BO14796 132 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 PNLIPP16233 465 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 HAAOP46952 286 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 RAB35Q15286 201 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 IAH1Q2TAA2 248 aaPredicted RBP14.86□□□□□ -0.03
SCN3B-202ENST00000392770 VASH2Q86V25 355 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 ZNF721Q8TF20 911 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 HRH4Q9H3N8 390 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 ZFP64Q9NPA5 681 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 CLPPQ16740 277 aaPredicted RBP14.86□□□□□ -0.03
SCN3B-202ENST00000392770 LSMEM1Q8N8F7 131 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 OR5H6Q8NGV6 325 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 OR6K3Q8NGY3 331 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 OR4A16Q8NH70 328 aa14.86□□□□□ -0.03
SCN3B-202ENST00000392770 KIR2DS1A0A191URI9 304 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 TEX51A0A1B0GUA7 166 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 RAB6AP20340 208 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 KIR2DS4P43632 304 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 KIR2DS1Q14954 304 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 OR11G2Q8NGC1 345 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 B8ZZF3 427 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 ENSAO43768 121 aaKnown RBP14.85□□□□□ -0.03
SCN3B-202ENST00000392770 FADS1O60427 444 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 FGF9P31371 208 aaPredicted RBP14.85□□□□□ -0.03
SCN3B-202ENST00000392770 STARD6P59095 220 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 WFDC8Q8IUA0 241 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 COQ3Q9NZJ6 369 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 SLCO1B1Q9Y6L6 691 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 RER1O15258 196 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 SPNP16150 400 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 ZNF14P17017 642 aaPredicted RBP14.85□□□□□ -0.03
SCN3B-202ENST00000392770 SRD5A2P31213 254 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 KRBOX4Q5JUW0 171 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 SLC52A3Q9NQ40 469 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 ZNF816-ZNF321PA0A0X1KG74 233 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 FAM221AA4D161 298 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 MPZL1O95297 269 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 CD3DP04234 171 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 CLDN20P56880 219 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 SIP14410 1827 aa14.85□□□□□ -0.03
SCN3B-202ENST00000392770 TRAV17A0A0B4J275 112 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 ZNF891A8MT65 544 aaPredicted RBP14.84□□□□□ -0.03
SCN3B-202ENST00000392770 PTAFRP25105 342 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 AADACL4Q5VUY2 407 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 DOK1Q99704 481 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 OCEL1Q9H607 264 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 ANKRD33BA6NCL7 494 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 EFSO43281 561 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 HRH1P35367 487 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 RAC1P63000 192 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 RNPS1Q15287 305 aaKnown RBP14.84□□□□□ -0.03
SCN3B-202ENST00000392770 MESTQ5EB52 335 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 MSI2Q96DH6 328 aaKnown RBP14.84□□□□□ -0.03
SCN3B-202ENST00000392770 SPACA1Q9HBV2 294 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 A0A1B0GTH9 108 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 XRCC3O43542 346 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 GLAP06280 429 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 SPATA46Q5T0L3 261 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 MAMSTRQ6ZN01 415 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.84□□□□□ -0.03
SCN3B-202ENST00000392770 RPA2P15927 270 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 GLRA1P23415 457 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 CDC20Q12834 499 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 TAF9Q16594 264 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 SHEQ5VZ18 495 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 PTDSS2Q9BVG9 487 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 BOLA1Q9Y3E2 137 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 CENPVL1A0A0U1RR11 272 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 SDCBPO00560 298 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms