RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CXCL12P48061 93 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 EDDM3AQ14507 147 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 H1FNTQ75WM6 255 aaPredicted RBP13.46□□□□□ -0.26
CCDC50-201ENST00000392455 CLEC18CQ8NCF0 446 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 C20orf24Q9BUV8 137 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 DUSP13Q9UII6 198 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 CCDC187A0A096LP49 1063 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 EIF4E2O60573 245 aaKnown RBP13.46□□□□□ -0.26
CCDC50-201ENST00000392455 MRPS21P82921 87 aaKnown RBP13.46□□□□□ -0.26
CCDC50-201ENST00000392455 C1orf220Q5T0J3 134 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 ANGPTL5Q86XS5 388 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 VRK2Q86Y07 508 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 OLIG1Q8TAK6 271 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 DUS3LQ96G46 650 aaKnown RBP13.46□□□□□ -0.26
CCDC50-201ENST00000392455 AKAP11Q9UKA4 1901 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 SLC25A4P12235 298 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 FAM74A3Q4VXF1 159 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 PDZD11Q5EBL8 140 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 LAX1Q8IWV1 398 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 MMP26Q9NRE1 261 aa13.46□□□□□ -0.26
CCDC50-201ENST00000392455 LAMA4Q16363 1823 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 HLA-BQ31612 363 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 GABRG1Q8N1C3 465 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 EDAQ92838 391 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 ERGIC1Q969X5 290 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 OR4C12Q96R67 309 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 DOCK8Q8NF50 2099 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 LINC01387J3KSC0 135 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 SRP9P49458 86 aaKnown RBP13.45□□□□□ -0.26
CCDC50-201ENST00000392455 OR2A2Q6IF42 318 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 RBPMS2Q6ZRY4 209 aaKnown RBP13.45□□□□□ -0.26
CCDC50-201ENST00000392455 A0A1B0GUH1 482 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 SIX6O95475 246 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 OR4E1P0C645 316 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 ADIPOQQ15848 244 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 OR5R1Q8NH85 324 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 PRSS16Q9NQE7 514 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 FPR3P25089 353 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 LSM11P83369 360 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC50-201ENST00000392455 RPL24P83731 157 aaKnown RBP13.45□□□□□ -0.26
CCDC50-201ENST00000392455 ZNF816Q0VGE8 651 aaPredicted RBP13.45□□□□□ -0.26
CCDC50-201ENST00000392455 TMIGD2Q96BF3 282 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 KLF16Q9BXK1 252 aaPredicted RBP13.45□□□□□ -0.26
CCDC50-201ENST00000392455 PIAS2O75928 621 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 CD80P33681 288 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 RPS25P62851 125 aaKnown RBP13.45□□□□□ -0.26
CCDC50-201ENST00000392455 ZNF766Q5HY98 468 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 OPALINQ96PE5 141 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 TAAR2Q9P1P5 351 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 TIMM10BQ9Y5J6 103 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 M0R3E3 92 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 SOD1P00441 154 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 OPN1MWP04001 364 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 OPN1MW2P0DN77 364 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 OPN1MW3P0DN78 364 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 TAS2R60P59551 318 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 GLIPR1L1Q6UWM5 242 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 C15orf39Q6ZRI6 1047 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 UBAC2Q8NBM4 344 aa13.45□□□□□ -0.26
CCDC50-201ENST00000392455 F5H697 171 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 NRASP01111 189 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 ALPLP05186 524 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 PVRP15151 417 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 PSMB5P28074 263 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 GPR85P60893 370 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 HNRNPA1L2Q32P51 320 aaKnown RBP13.44□□□□□ -0.26
CCDC50-201ENST00000392455 TAS1R1Q7RTX1 841 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 NECAP1Q8NC96 275 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 TMEM116Q8NCL8 245 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 MRPL13Q9BYD1 178 aaKnown RBP13.44□□□□□ -0.26
CCDC50-201ENST00000392455 FIGNL2A6NMB9 653 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 EMP3P54852 163 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 CIRBPQ14011 172 aaKnown RBP13.44□□□□□ -0.26
CCDC50-201ENST00000392455 PNPLA1Q8N8W4 532 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 EXTL1Q92935 676 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 NEURL3Q96EH8 262 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 SLC17A4Q9Y2C5 497 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 F5P12259 2224 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 SERPINE3A8MV23 424 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 B4DEV8 164 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 SDC1P18827 310 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 VEGFBP49765 207 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 TCEAL8Q8IYN2 117 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 MYO16Q9Y6X6 1858 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 POLEQ07864 2286 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 ZNF354AO60765 605 aaPredicted RBP13.44□□□□□ -0.26
CCDC50-201ENST00000392455 CD99P14209 185 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 RIGQ13278 110 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 ZNF813Q6ZN06 617 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 RSG1Q9BU20 258 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 BCL3P20749 454 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 B3GNT9Q6UX72 402 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 ADGRG7Q96K78 797 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 MRPL37Q9BZE1 423 aaKnown RBP13.44□□□□□ -0.26
CCDC50-201ENST00000392455 NAT8BQ9UHF3 227 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 PRSS21Q9Y6M0 314 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 ZNF407Q9C0G0 2248 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 TMEM129A0AVI4 362 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 H0YIV9 168 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 DNASE2O00115 360 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms