RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 IGKV1D-43A0A0B4J1Z2 117 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 EIF3GO75821 320 aaKnown RBP eCLIP12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 ASAH2BP0C7U1 165 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 JMJD7P0C870 316 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 SHHQ15465 462 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 GLIPR1L1Q6UWM5 242 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 OR4A4PQ8NGN8 299 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 ADAT3Q96EY9 351 aaPredicted RBP12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 BARX1Q9HBU1 254 aaPredicted RBP12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 SLC2A4RGQ9NR83 387 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 NDRG3Q9UGV2 375 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 TMEM150CB9EJG8 249 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 NPIPB9F8W1W9 429 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 H0YIZ8 118 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 C1QL1O75973 258 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 SFTA3P0C7M3 94 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 RPL27P61353 136 aaKnown RBP12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 RPS4XP62701 263 aaKnown RBP12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 CSNK2A1P68400 391 aaPredicted RBP12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 RTL10Q7L3V2 364 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 NAA40Q86UY6 237 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 CSNK2A3Q8NEV1 391 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 LILRB1Q8NHL6 650 aaPredicted RBP12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 FAM86C1Q9NVL1 165 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 MED9Q9NWA0 146 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 CACNA1DQ01668 2161 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 TMED7-TICAM2A0A0A6YYA0 188 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 TEX13DA0A0J9YY54 714 aaPredicted RBP12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 hCG_1809904A0A1W2PP81 198 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 A0A1W2PR64 198 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 A0A1W2PRV1 198 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 TTLL8A6PVC2 850 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 EIF4E2O60573 245 aaKnown RBP12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 CRHP06850 196 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 NQO2P16083 231 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 HSD11B1P28845 292 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 EGR3Q06889 387 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 SKP2Q13309 424 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 SP6Q3SY56 376 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 RNF128Q8TEB7 428 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 FAM117AQ9C073 453 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 LAT2Q9GZY6 243 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 DUSP15Q9H1R2 295 aaPredicted RBP12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZFP57Q9NU63 452 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 DZANK1Q9NVP4 752 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 SLC5A6Q9Y289 635 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF407Q9C0G0 2248 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 FAM221AA4D161 298 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 XRCC2O43543 280 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF735P0CB33 412 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 BCKDHBP21953 392 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZBTB25P24278 435 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 SLC25A1P53007 311 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 MPPED2Q15777 294 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 PDZD11Q5EBL8 140 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 OR2A2Q6IF42 318 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 BRICD5Q6PL45 260 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 DRAM2Q6UX65 266 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 PIK3IP1Q96FE7 263 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 PRMT8Q9NR22 394 aaPredicted RBP12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 EHFQ9NZC4 300 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 PCOLCE2Q9UKZ9 415 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 CLDN16Q9Y5I7 305 aa12.98□□□□□ -0.33
LRRFIP1-204ENST00000392000 RAB27BO00194 218 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 ADAM10O14672 748 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 SERPINA2P20848 420 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF93P35789 620 aaPredicted RBP12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 FHITP49789 147 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 F2RL1P55085 397 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 FXYD4P59646 89 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 PPP1R3BQ86XI6 285 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 PMM1Q92871 262 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 JSRP1Q96MG2 331 aaPredicted RBP12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF275Q9NSD4 429 aaPredicted RBP12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 PRODH2Q9UF12 536 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 A6NLC8 198 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 APOC1P02654 83 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 CALCRP30988 508 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 DMWDQ09019 674 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 FZD2Q14332 565 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 OR1M1Q8NGA1 313 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 OR52N5Q8NH56 324 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 OR10C1Q96KK4 312 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 CD207Q9UJ71 328 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 URGCP-MRPS24S4R325 110 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 EFSO43281 561 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 NDUFA2O43678 99 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 NXPH3O95157 252 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 VSIG8P0DPA2 414 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 RAB5BP61020 215 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 IKZF1Q13422 519 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 FAM69BQ5VUD6 431 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 Q6ZRG5 221 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 PNLDC1Q8NA58 520 aaKnown RBP12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 HSD17B11Q8NBQ5 300 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 OR5T2Q8NGG2 359 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 PTPMT1Q8WUK0 201 aaPredicted RBP12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 UQCC2Q9BRT2 126 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 POLE3Q9NRF9 147 aa12.97□□□□□ -0.33
LRRFIP1-204ENST00000392000 FBXO7Q9Y3I1 522 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms