RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 SYTL2Q9HCH5 934 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 MED17Q9NVC6 651 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 SLC25A37Q9NYZ2 338 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 MIOXQ9UGB7 285 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 ANAPC7Q9UJX3 599 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 BARX2Q9UMQ3 279 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 FAM50BQ9Y247 325 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 STK38LQ9Y2H1 464 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 CMAHPQ9Y471 501 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 USP54Q70EL1 1684 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 NRAPQ86VF7 1730 aa-1.72□□□□□ -2.69
RNU6-540P-201ENST00000384622 PTPRBP23467 1997 aa-1.72□□□□□ -2.69
RNU6-540P-201ENST00000384622 KIAA0556O60303 1618 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 TRPM1Q7Z4N2 1603 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 NOS1P29475 1434 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 PTPRKQ15262 1439 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 RIMS2Q9UQ26 1411 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 A0A087WX48 190 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 LOC102724200A0A096LPH7 203 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 A0A0A6YYD4 124 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 FAM170AA1A519 330 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 CLDN24A6NM45 220 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 A8MXQ7 604 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 C17orf105B2RV13 164 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 H0YIG0 161 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 PRMT5O14744 637 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 PSTPIP1O43586 416 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 ALOX12BO75342 701 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 GATBO75879 557 aaKnown RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 OR2J2O76002 312 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 MFN2O95140 757 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 ANP32DO95626 131 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 EPOP01588 193 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 HLA-DPB1P04440 258 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 ARG1P05089 322 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 OR52Z1P0C646 297 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 SCG2P13521 617 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 COX6B1P14854 86 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 TNNI3P19429 210 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 VDAC1P21796 283 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 CYP2F1P24903 491 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 PSMB5P28074 263 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 LGALS7P47929 136 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 TMED10P49755 219 aaKnown RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 AP3M2P53677 418 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 CDH4P55283 916 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 C1QTNF8P60827 252 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 RPL37P61927 97 aaKnown RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 ESRRGP62508 458 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 RPS15P62841 145 aaKnown RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 BASP1P80723 227 aaKnown RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 ACTN3Q08043 901 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 ABRQ12979 859 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 SCARB2Q14108 478 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 ZNF846Q147U1 533 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 CDK10Q15131 360 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 SGCAQ16586 387 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 LRRC75BQ2VPJ9 315 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 CFAP221Q4G0U5 840 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 TEX44Q53QW1 395 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 RNASEH2BQ5TBB1 312 aaKnown RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 TTC27Q6P3X3 843 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 LRRC8BQ6P9F7 803 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 PRSS54Q6PEW0 395 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 XKRXQ6PP77 449 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 CES3Q6UWW8 571 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 TEX43Q6ZNM6 134 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 C3orf62Q6ZUJ4 267 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 EFL1Q7Z2Z2 1120 aaKnown RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 PIGWQ7Z7B1 504 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 UNC93AQ86WB7 457 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 MCEMP1Q8IX19 187 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 THNSL1Q8IYQ7 743 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 PUSL1Q8N0Z8 303 aaKnown RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 RYBPQ8N488 228 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 FRMD1Q8N878 549 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 PI4KAP1Q8N8J0 262 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 DRAXINQ8NBI3 349 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 ICA1LQ8NDH6 482 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 NEK11Q8NG66 645 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 OR1M1Q8NGA1 313 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 AKR7LQ8NHP1 331 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 SHC3Q92529 594 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 PTX4Q96A99 478 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 EPSTI1Q96J88 318 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 C8orf48Q96LL4 319 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 INTS14Q96SY0 518 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 SLC2A11Q9BYW1 496 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 LPAR5Q9H1C0 372 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 C11orf49Q9H6J7 331 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 METTL7AQ9H8H3 244 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 TAF9BQ9HBM6 251 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 SLC40A1Q9NP59 571 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 RIC8AQ9NPQ8 531 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 RRP7BPQ9NSQ0 103 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 AGPAT5Q9NUQ2 364 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 MED29Q9NX70 200 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 GOLGA6AQ9NYA3 693 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 VPS18Q9P253 973 aa-1.73□□□□□ -2.69
RNU6-540P-201ENST00000384622 CLCF1Q9UBD9 225 aa-1.73□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms