RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 SUSD3Q96L08 255 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 STACQ99469 402 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 COMMD4Q9H0A8 199 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 PRSS16Q9NQE7 514 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 CGGBP1Q9UFW8 167 aaPredicted RBP13.49□□□□□ -0.25
VLDLR-202ENST00000382099 SIGLEC7Q9Y286 467 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 H3BNC9 293 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 GCGP01275 180 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 FCARP24071 287 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 CORO1AP31146 461 aaKnown RBP13.49□□□□□ -0.25
VLDLR-202ENST00000382099 GPR3P46089 330 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 TAS2R38P59533 333 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 LEMD1Q68G75 181 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 SVIPQ8NHG7 77 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 ZNF417Q8TAU3 575 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 NIPSNAP3BQ9BS92 247 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 ADAP2Q9NPF8 381 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 CLEC12BQ2HXU8 276 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 CTXN3Q4LDR2 81 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 ZNF100Q8IYN0 542 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 OR13D1Q8NGV5 346 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 ZNF558Q96NG5 402 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 PCDHB8Q9UN66 801 aa13.49□□□□□ -0.25
VLDLR-202ENST00000382099 NPIPA5A0A0B4J1W7 369 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 OR4C45A6NMZ5 311 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 NPIPA7E9PJI5 369 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 IFNL4K9M1U5 179 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 TBL1XO60907 577 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 NPIPA8P0DM63 369 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 NID1P14543 1247 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 SSR2P43308 183 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 ZNF880Q6PDB4 577 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 RSPO2Q6UXX9 243 aaPredicted RBP13.48□□□□□ -0.25
VLDLR-202ENST00000382099 TMEM182Q6ZP80 229 aaPredicted RBP13.48□□□□□ -0.25
VLDLR-202ENST00000382099 MDGA2Q7Z553 956 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 RTN4RL1Q86UN2 441 aaPredicted RBP13.48□□□□□ -0.25
VLDLR-202ENST00000382099 OR1P1Q8NH06 330 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 THAP3Q8WTV1 239 aaPredicted RBP13.48□□□□□ -0.25
VLDLR-202ENST00000382099 CCDC74AQ96AQ1 378 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 GPR62Q9BZJ7 368 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 TRIOO75962 3097 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 PLXND1Q9Y4D7 1925 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 A8MXE2 369 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 ITGB1BP1O14713 200 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 HOXA2O43364 376 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 CYB5R3P00387 301 aaPredicted RBP13.48□□□□□ -0.25
VLDLR-202ENST00000382099 IL2RAP01589 272 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 SLC6A6P31641 620 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 TNFSF10P50591 281 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 UCP3P55916 312 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 ULK3Q6PHR2 472 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 OR2AP1Q8NGE2 309 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 CMBLQ96DG6 245 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 SLC41A2Q96JW4 573 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 SDK1Q7Z5N4 2213 aa13.48□□□□□ -0.25
VLDLR-202ENST00000382099 A0A1W2PS29 197 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 GJB5O95377 273 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 MC3RP41968 323 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 VASPP50552 380 aaPredicted RBP13.47□□□□□ -0.25
VLDLR-202ENST00000382099 H3F3AP84243 136 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 PMPCAQ10713 525 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 OTPQ5XKR4 325 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 TUBG2Q9NRH3 451 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 HAO2Q9NYQ3 351 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 KIF26AQ9ULI4 1882 aaPredicted RBP13.47□□□□□ -0.25
VLDLR-202ENST00000382099 PRR32B1ATL7 298 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 TACSTD2P09758 323 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 FUT3P21217 361 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 SERPINA4P29622 427 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 ARRB1P49407 418 aaPredicted RBP13.47□□□□□ -0.25
VLDLR-202ENST00000382099 OR1Q1Q15612 314 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 GLYATL3Q5SZD4 288 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 KIRREL2Q6UWL6 708 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 MED25Q71SY5 747 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 UBE2E3Q969T4 207 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 FRRS1LQ9P0K9 344 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 RNF24Q9Y225 148 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 ZNF443Q9Y2A4 671 aaPredicted RBP13.47□□□□□ -0.25
VLDLR-202ENST00000382099 PNPP00491 289 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 IGHEP01854 428 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 TK1P04183 234 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 FGF5P12034 268 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 IDH3GP51553 393 aaPredicted RBP13.47□□□□□ -0.25
VLDLR-202ENST00000382099 TMEM268Q5VZI3 342 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 CSNK1A1LQ8N752 337 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 NUP43Q8NFH3 380 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 OR1L6Q8NGR2 347 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 RSC1A1Q92681 617 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 WBP2Q969T9 261 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 TVP23CQ96ET8 276 aa13.47□□□□□ -0.25
VLDLR-202ENST00000382099 ABT1Q9ULW3 272 aaKnown RBP13.47□□□□□ -0.25
VLDLR-202ENST00000382099 A0A0A6YYH2 397 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 A6NJ64 397 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 IGLV3-27P01718 113 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 GABRA4P48169 554 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 CLDN6P56747 220 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 PRPS1P60891 318 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 SSBP1Q04837 148 aaKnown RBP13.46□□□□□ -0.25
VLDLR-202ENST00000382099 TPRG1Q6ZUI0 275 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 SLC35D2Q76EJ3 337 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms