RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 DDX28Q9NUL7 540 aaKnown RBP7.87□□□□□ -1.15
HMGN1-202ENST00000380747 H2AFY2Q9P0M6 372 aaPredicted RBP7.87□□□□□ -1.15
HMGN1-202ENST00000380747 CCDC182A6NF36 153 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 CDC14BO60729 498 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 NCR1O76036 304 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 BPNT1O95861 308 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 IGHV1-46P01743 117 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 ALPLP05186 524 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 ANXA2P07355 339 aaKnown RBP7.86□□□□□ -1.15
HMGN1-202ENST00000380747 MRPL3P09001 348 aaKnown RBP7.86□□□□□ -1.15
HMGN1-202ENST00000380747 H2BFMP0C1H6 154 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 SLC2A1P11166 492 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 RAC2P15153 192 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 KITLGP21583 273 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 HSD11B1P28845 292 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 LIPAP38571 399 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 SLC15A1P46059 708 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 ALDH3A2P51648 485 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 RAD23AP54725 363 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 GRB2P62993 217 aaKnown RBP7.86□□□□□ -1.15
HMGN1-202ENST00000380747 GABPB1Q06547 395 aaPredicted RBP7.86□□□□□ -1.15
HMGN1-202ENST00000380747 KRTAP1-1Q07627 177 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 ZSCAN26Q16670 478 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 ZMAT1Q5H9K5 638 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 OR2T2Q6IF00 324 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 DRAM2Q6UX65 266 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 COLCA1Q6ZS62 124 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 MEPCEQ7L2J0 689 aaKnown RBP7.86□□□□□ -1.15
HMGN1-202ENST00000380747 SLC16A9Q7RTY1 509 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 MRPL21Q7Z2W9 205 aaKnown RBP7.86□□□□□ -1.15
HMGN1-202ENST00000380747 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.86□□□□□ -1.15
HMGN1-202ENST00000380747 ZNF786Q8N393 782 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 TMEM163Q8TC26 289 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 AMELYQ99218 206 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 TEAD3Q99594 435 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 KCNJ15Q99712 375 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 C9orf16Q9BUW7 83 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 C1QTNF5Q9BXJ0 243 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 MSL2Q9HCI7 577 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 NKIRAS2Q9NYR9 191 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 USE1Q9NZ43 259 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 DNAJC27Q9NZQ0 273 aa7.86□□□□□ -1.15
HMGN1-202ENST00000380747 CGGBP1Q9UFW8 167 aaPredicted RBP7.86□□□□□ -1.15
HMGN1-202ENST00000380747 CHD3Q12873 2000 aaKnown RBP7.86□□□□□ -1.15
HMGN1-202ENST00000380747 PLCE1Q9P212 2302 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 RNF212BA8MTL3 300 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 VWC2LB2RUY7 222 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 TBX1O43435 398 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 LYNP07948 512 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 USF1P22415 310 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-202ENST00000380747 COL8A2P25067 703 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 NR4A2P43354 598 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 GPR6P46095 362 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-202ENST00000380747 CX3CR1P49238 355 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 HCCSP53701 268 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 TNFAIP6P98066 277 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-202ENST00000380747 SNAI3Q3KNW1 292 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 AADACL4Q5VUY2 407 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 NXNL2Q5VZ03 156 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 SHISA2Q6UWI4 295 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 FBXW12Q6X9E4 464 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 Q6ZR03 302 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 USP51Q70EK9 711 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 KRT77Q7Z794 578 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 GID4Q8IVV7 300 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 PHC2Q8IXK0 858 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 ZNF540Q8NDQ6 660 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 BHLHE23Q8NDY6 225 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 OR2Z1Q8NG97 314 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 OR2AE1Q8NHA4 323 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 OTOSQ8NHW6 89 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 FAM81AQ8TBF8 368 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 RNF133Q8WVZ7 376 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 TMEM158Q8WZ71 300 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 YIPF5Q969M3 257 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 EME1Q96AY2 570 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 ELMOD3Q96FG2 381 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 ZNF582Q96NG8 517 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-202ENST00000380747 DIRC2Q96SL1 478 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 CNN2Q99439 309 aaKnown RBP7.85□□□□□ -1.15
HMGN1-202ENST00000380747 BPESC1Q9GZL8 116 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 EGLN1Q9GZT9 426 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 TOR3AQ9H497 397 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 SAP30LQ9HAJ7 183 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 LAMP5Q9UJQ1 280 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 KLHDC2Q9Y2U9 406 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 ABCA1O95477 2261 aa7.85□□□□□ -1.15
HMGN1-202ENST00000380747 A0A096LNT2 108 aa7.84□□□□□ -1.15
HMGN1-202ENST00000380747 IGHV4-61A0A0C4DH41 118 aa7.84□□□□□ -1.15
HMGN1-202ENST00000380747 IGHV1-69-2A0A0G2JMI3 117 aa7.84□□□□□ -1.15
HMGN1-202ENST00000380747 C5orf63A6NC05 138 aa7.84□□□□□ -1.15
HMGN1-202ENST00000380747 GGT3PA6NGU5 568 aa7.84□□□□□ -1.15
HMGN1-202ENST00000380747 SLC22A31A6NKX4 558 aa7.84□□□□□ -1.15
HMGN1-202ENST00000380747 PSMD9O00233 223 aa7.84□□□□□ -1.15
HMGN1-202ENST00000380747 PPIHO43447 177 aaKnown RBP7.84□□□□□ -1.15
HMGN1-202ENST00000380747 IFNA2P01563 188 aa7.84□□□□□ -1.15
HMGN1-202ENST00000380747 SELEP16581 610 aa7.84□□□□□ -1.15
HMGN1-202ENST00000380747 ALOX5APP20292 161 aa7.84□□□□□ -1.15
HMGN1-202ENST00000380747 ACHEP22303 614 aa7.84□□□□□ -1.15
HMGN1-202ENST00000380747 TNFSF4P23510 183 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms