RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 PROB1E7EW31 1015 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 GABARAPH6UMI1 98 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 SYNGR3O43761 229 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 PTHLHP12272 177 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 ZNF32P17041 273 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 ZNF774Q6NX45 483 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 SIAH3Q8IW03 269 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 OR4D6Q8NGJ1 314 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 OR52I2Q8NH67 350 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 SPTSSAQ969W0 71 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 WDYHV1Q96HA8 205 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 LYZL4Q96KX0 146 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 LINC00470Q9BZP3 86 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 ZNF724A8MTY0 619 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 IGLV3-1P01715 115 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 APOC1P02654 83 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 RAB3AP20336 220 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 SLC6A1P30531 599 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 GDNFP39905 211 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 MNDAP41218 407 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 SCRN3Q0VDG4 424 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 SKA3Q8IX90 412 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 FGFBP3Q8TAT2 258 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 CHAC2Q8WUX2 184 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 FCAMRQ8WWV6 532 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 SORCS2Q96PQ0 1159 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 RNF122Q9H9V4 155 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 RHBDD3Q9Y3P4 386 aa17.39■□□□□ 0.37
PDLIM5-205ENST00000380180 A0A0U1RQV5 110 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 YES1P07947 543 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 CPN1P15169 458 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 CRYGSP22914 178 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 BTCP35070 178 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 RNPS1Q15287 305 aaKnown RBP17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 RSBN1Q5VWQ0 802 aaPredicted RBP17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 SLC16A14Q7RTX9 510 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 DRAXINQ8NBI3 349 aaPredicted RBP17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 OR14K1Q8NGZ2 314 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 OR1F12Q8NHA8 337 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 CNTD2Q9H8S5 307 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 DIABLOQ9NR28 239 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 TIMM10BQ9Y5J6 103 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 KCNMB2Q9Y691 235 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 CUL9Q8IWT3 2517 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 EFSO43281 561 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 PSG4Q00888 419 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 AKR7LQ8NHP1 331 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 C15orf40Q8WUR7 153 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 UPRTQ96BW1 309 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 ATG5Q9H1Y0 275 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 PLEKHA1Q9HB21 404 aa17.38■□□□□ 0.37
PDLIM5-205ENST00000380180 AKAP13Q12802 2813 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 CIB4A0PJX0 185 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 GGT3PA6NGU5 568 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 CENPXA8MT69 81 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 TPPPO94811 219 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 KDM4BO94953 1096 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 ECH1Q13011 328 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 KLF9Q13886 244 aaPredicted RBP17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 RSPO4Q2I0M5 234 aaPredicted RBP17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 PLA1AQ53H76 456 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 PGAP1Q75T13 922 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 MARVELD1Q9BSK0 173 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 MYEF2Q9P2K5 600 aaKnown RBP17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 KLK11Q9UBX7 282 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 A0A0B4J293 547 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 LDLRAD4O15165 306 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 TPTEP56180 551 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 PCBD1P61457 104 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 MRPS10P82664 201 aaKnown RBP17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 SFRP5Q5T4F7 317 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 AKAP14Q86UN6 197 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 MCEMP1Q8IX19 187 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 PHF21AQ96BD5 680 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 OR2H1Q9GZK4 316 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 METTL17Q9H7H0 456 aaPredicted RBP17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 NPAP1Q9NZP6 1156 aa17.37■□□□□ 0.37
PDLIM5-205ENST00000380180 TRAV17A0A0B4J275 112 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 OR6C6A6NF89 314 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 RPL36A-HNRNPH2H7BZ11 118 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 CEACAM4O75871 244 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 FARS2O95363 451 aaKnown RBP17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 TGM6O95932 706 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 ZNF24P17028 368 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 ARF1P84077 181 aaKnown RBP17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 SNAI3Q3KNW1 292 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 C9orf135Q5VTT2 229 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 DRAM2Q6UX65 266 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 ADGRE4PQ86SQ3 457 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 OR5AS1Q8N127 324 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 APH1AQ96BI3 265 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 UQCC2Q9BRT2 126 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 WNT5BQ9H1J7 359 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 MRPL15Q9P015 296 aaKnown RBP17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 RBMX2Q9Y388 322 aaKnown RBP17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 CFAP47Q6ZTR5 3102 aa17.36■□□□□ 0.37
PDLIM5-205ENST00000380180 TRAV18A0A075B6X5 111 aa17.35■□□□□ 0.37
PDLIM5-205ENST00000380180 OR6C65A6NJZ3 312 aa17.35■□□□□ 0.37
PDLIM5-205ENST00000380180 ERCC1P07992 297 aaPredicted RBP17.35■□□□□ 0.37
PDLIM5-205ENST00000380180 HGFACQ04756 655 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms