RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 PIGQQ9BRB3 760 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 SEC22CQ9BRL7 303 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 ASH2LQ9UBL3 628 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 FBLN5Q9UBX5 448 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 A0A1B0GTI1 187 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 OR2M5A3KFT3 312 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 ZIC3O60481 467 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 GIPP09681 153 aaPredicted RBP19.03■□□□□ 0.64
TRIM54-202ENST00000380075 ZNF20P17024 532 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 ANXA7P20073 488 aaKnown RBP19.03■□□□□ 0.64
TRIM54-202ENST00000380075 CTSSP25774 331 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 CDAP32320 146 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 CSNK1A1P48729 337 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 RAC1P63000 192 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 CHAF1BQ13112 559 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 FOXL2NBQ6ZUU3 175 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 GABRG1Q8N1C3 465 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 OR4D6Q8NGJ1 314 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 TMEM54Q969K7 222 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 INTS12Q96CB8 462 aaKnown RBP19.03■□□□□ 0.64
TRIM54-202ENST00000380075 ADAT3Q96EY9 351 aaPredicted RBP19.03■□□□□ 0.64
TRIM54-202ENST00000380075 NUDT16L1Q9BRJ7 211 aaKnown RBP19.03■□□□□ 0.64
TRIM54-202ENST00000380075 CNTD2Q9H8S5 307 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 PNRC2Q9NPJ4 139 aaKnown RBP19.03■□□□□ 0.64
TRIM54-202ENST00000380075 UPB1Q9UBR1 384 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 ZNF69Q9UC07 566 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 SLC5A6Q9Y289 635 aa19.03■□□□□ 0.64
TRIM54-202ENST00000380075 UBE2QL1A1L167 161 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 A6NL46 340 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 PYCARD-AS1I3L0S3 204 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 CCL1P22362 96 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 PGAP1Q75T13 922 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 NLRC3Q7RTR2 1065 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 IL22RA1Q8N6P7 574 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 OR11H4Q8NGC9 324 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 CFAP47Q6ZTR5 3102 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 CHD8Q9HCK8 2581 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 TPOP07202 933 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 TCN2P20062 427 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 GSK3AP49840 483 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 SLC36A1Q7Z2H8 476 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 OR2T35Q8NGX2 323 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 OR51E1Q8TCB6 317 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 FAM46BQ96A09 425 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 PNPLA2Q96AD5 504 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 MGAT4CQ9UBM8 478 aa19.02■□□□□ 0.64
TRIM54-202ENST00000380075 NPIPA2E9PIF3 369 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 NPIPA3F8WFD2 350 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 ALX3O95076 343 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 CD3DP04234 171 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 MSR1P21757 451 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 SELENOPP49908 381 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 ZNF121P58317 390 aaPredicted RBP19.01■□□□□ 0.63
TRIM54-202ENST00000380075 GALK2Q01415 458 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 CLN3Q13286 438 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 SNIP1Q8TAD8 396 aaKnown RBP19.01■□□□□ 0.63
TRIM54-202ENST00000380075 CT55Q8WUE5 264 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 SNAPC3Q92966 411 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 ALX4Q9H161 411 aaPredicted RBP19.01■□□□□ 0.63
TRIM54-202ENST00000380075 NELFAQ9H3P2 528 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 HPP00738 406 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 RAP2BP61225 183 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 DOK3Q7L591 496 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 PPP1R32Q7Z5V6 425 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 OR8B12Q8NGG6 310 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 OR52N4Q8NGI2 321 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 OR51S1Q8NGJ8 323 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 NKX3-1Q99801 234 aaPredicted RBP19.01■□□□□ 0.63
TRIM54-202ENST00000380075 SLC25A21Q9BQT8 299 aaPredicted RBP19.01■□□□□ 0.63
TRIM54-202ENST00000380075 TCFL5Q9UL49 500 aa19.01■□□□□ 0.63
TRIM54-202ENST00000380075 RER1O15258 196 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 OR2A4O95047 310 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 RAB3DO95716 219 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 CYB5AP00167 134 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 KLK2P20151 261 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 SRD5A2P31213 254 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 HTR2BP41595 481 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 CX3CR1P49238 355 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 PRKXP51817 358 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 OR9K2Q8NGE7 335 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 OR4D10Q8NGI6 311 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 KCNE4Q8WWG9 221 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 AQP3Q92482 292 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 JSRP1Q96MG2 331 aaPredicted RBP19■□□□□ 0.63
TRIM54-202ENST00000380075 OR2A7Q96R45 310 aa19■□□□□ 0.63
TRIM54-202ENST00000380075 SF3B5Q9BWJ5 86 aaKnown RBP19■□□□□ 0.63
TRIM54-202ENST00000380075 APC2O95996 2303 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 IGF2RP11717 2491 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 CD74P04233 296 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 P04436 131 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 DLSTP36957 453 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 SUCLG1P53597 346 aaKnown RBP18.99■□□□□ 0.63
TRIM54-202ENST00000380075 QRFPP83859 136 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 SRSF6Q13247 344 aaKnown RBP18.99■□□□□ 0.63
TRIM54-202ENST00000380075 SSPNQ14714 243 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 ABHD12BQ7Z5M8 362 aaPredicted RBP18.99■□□□□ 0.63
TRIM54-202ENST00000380075 VASH2Q86V25 355 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 ZNF283Q8N7M2 679 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 GJC3Q8NFK1 279 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 CCDC107Q8WV48 283 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms