RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 FAM57BQ71RH2 274 aa16■□□□□ 0.15
SSU72-203ENST00000378725 KRTAP1-3Q8IUG1 177 aa16■□□□□ 0.15
SSU72-203ENST00000378725 ACBD7Q8N6N7 88 aa16■□□□□ 0.15
SSU72-203ENST00000378725 VRK1Q99986 396 aaPredicted RBP16■□□□□ 0.15
SSU72-203ENST00000378725 TTTY10Q9BZA0 68 aa16■□□□□ 0.15
SSU72-203ENST00000378725 BARX1Q9HBU1 254 aaPredicted RBP16■□□□□ 0.15
SSU72-203ENST00000378725 FGF20Q9NP95 211 aaPredicted RBP16■□□□□ 0.15
SSU72-203ENST00000378725 CYSLTR2Q9NS75 346 aa16■□□□□ 0.15
SSU72-203ENST00000378725 N6AMT1Q9Y5N5 214 aa16■□□□□ 0.15
SSU72-203ENST00000378725 NAV2Q8IVL1 2488 aa16■□□□□ 0.15
SSU72-203ENST00000378725 TMEM269A0A1B0GVZ9 245 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 DAPL1A0PJW8 107 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 C17orf100A8MU93 164 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 IGHA1P01876 353 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 KRT8P05787 483 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 SELEP16581 610 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 OR2T2Q6IF00 324 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 PGAP1Q75T13 922 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 KCTD20Q7Z5Y7 419 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 EGFL6Q8IUX8 553 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 OR52I1Q8NGK6 324 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 SNX33Q8WV41 574 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 NEU4Q8WWR8 484 aaPredicted RBP15.99■□□□□ 0.15
SSU72-203ENST00000378725 ZNF649Q9BS31 505 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 JAM3Q9BX67 310 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 OR10A2Q9H208 303 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 OPA3Q9H6K4 179 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 INPP5EQ9NRR6 644 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 PLCXD1Q9NUJ7 323 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 NKIRAS2Q9NYR9 191 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 MYRFQ9Y2G1 1151 aa15.99■□□□□ 0.15
SSU72-203ENST00000378725 IQCF6A8MYZ5 107 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 TBX1O43435 398 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 TIMM8AO60220 97 aaPredicted RBP15.98■□□□□ 0.15
SSU72-203ENST00000378725 PNPP00491 289 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 MT-ND5P03915 603 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 ADH4P08319 380 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 MYF6P23409 242 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 ZNF81P51508 661 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 GALEQ14376 348 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 ZNF829Q3KNS6 432 aaPredicted RBP15.98■□□□□ 0.15
SSU72-203ENST00000378725 CDONQ4KMG0 1287 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 LIPNQ5VXI9 398 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 PLEKHG7Q6ZR37 379 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 MRPL21Q7Z2W9 205 aaKnown RBP15.98■□□□□ 0.15
SSU72-203ENST00000378725 OR8G5Q8NG78 346 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 OR2AE1Q8NHA4 323 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 GTF3AQ92664 365 aaKnown RBP15.98■□□□□ 0.15
SSU72-203ENST00000378725 PGAM5Q96HS1 289 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 ANKRD60Q9BZ19 345 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 RGCCQ9H4X1 137 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 BRD7Q9NPI1 651 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 R4GMQ9 66 aa15.98■□□□□ 0.15
SSU72-203ENST00000378725 ANKRD17O75179 2603 aaKnown RBP15.98■□□□□ 0.15
SSU72-203ENST00000378725 A0A1B0GWJ7 208 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 PLSCR5A0PG75 271 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 IRGMA1A4Y4 181 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 ZSCAN5BA6NJL1 495 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 ERCC1P07992 297 aaPredicted RBP15.97■□□□□ 0.15
SSU72-203ENST00000378725 CFL1P23528 166 aaKnown RBP15.97■□□□□ 0.15
SSU72-203ENST00000378725 ZMAT1Q5H9K5 638 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 Q6ZR03 302 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 DNM1P46Q6ZS02 220 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 YIPF7Q8N8F6 280 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 OR8B12Q8NGG6 310 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 GGHQ92820 318 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 REEP6Q96HR9 211 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 MYCBPQ99417 103 aaPredicted RBP15.97■□□□□ 0.15
SSU72-203ENST00000378725 PBOV1Q9GZY1 135 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 TPK1Q9H3S4 243 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 G6PC2Q9NQR9 355 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 ERVK13-1Q9NX77 482 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 NUFIP1Q9UHK0 495 aaKnown RBP15.97■□□□□ 0.15
SSU72-203ENST00000378725 ZNF391Q9UJN7 358 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 ZDHHC8Q9ULC8 765 aa15.97■□□□□ 0.15
SSU72-203ENST00000378725 CD300LBA8K4G0 201 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 FAM20BO75063 409 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 IGHV1-46P01743 117 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 DCKP27707 260 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 CSNK2BP67870 215 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 FAM3AP98173 230 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 MFGE8Q08431 387 aaPredicted RBP15.96■□□□□ 0.15
SSU72-203ENST00000378725 TIGD6Q17RP2 521 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 PCGF3Q3KNV8 242 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 Q5PR19 223 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 SPNS3Q6ZMD2 512 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 LHFPL3Q86UP9 236 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 RNF166Q96A37 237 aaPredicted RBP15.96■□□□□ 0.15
SSU72-203ENST00000378725 SIGLEC11Q96RL6 698 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 DIRC2Q96SL1 478 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 SLC30A2Q9BRI3 323 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 RASSF4Q9H2L5 321 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 MSL2Q9HCI7 577 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 RAB26Q9ULW5 256 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 SNX5Q9Y5X3 404 aa15.96■□□□□ 0.15
SSU72-203ENST00000378725 ARFGEF3Q5TH69 2177 aa15.95■□□□□ 0.14
SSU72-203ENST00000378725 A0A0U1RQV5 110 aa15.95■□□□□ 0.14
SSU72-203ENST00000378725 hCG_38984A0A1B0GV85 526 aa15.95■□□□□ 0.14
SSU72-203ENST00000378725 SPRY3O43610 288 aa15.95■□□□□ 0.14
SSU72-203ENST00000378725 SSX4O60224 188 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms