RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 HIST1H1TP22492 207 aaPredicted RBP8□□□□□ -1.13
LIG3-202ENST00000378526 DGAT2L7PQ6IED9 249 aa8□□□□□ -1.13
LIG3-202ENST00000378526 VASH2Q86V25 355 aa8□□□□□ -1.13
LIG3-202ENST00000378526 PTRH1Q86Y79 214 aaKnown RBP8□□□□□ -1.13
LIG3-202ENST00000378526 PHOSPHO2Q8TCD6 241 aa8□□□□□ -1.13
LIG3-202ENST00000378526 IL25Q9H293 177 aa8□□□□□ -1.13
LIG3-202ENST00000378526 METTL1Q9UBP6 276 aaKnown RBP8□□□□□ -1.13
LIG3-202ENST00000378526 FDXRP22570 491 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 PCSK6P29122 969 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 DAPP51397 102 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 CLDN12P56749 244 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 ZNF628Q5EBL2 1059 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 ELFN2Q5R3F8 820 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 GMPPAQ96IJ6 420 aaPredicted RBP7.99□□□□□ -1.13
LIG3-202ENST00000378526 PELI2Q9HAT8 420 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 JKAMPQ9P055 326 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 OR2W1Q9Y3N9 320 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 GPR45Q9Y5Y3 372 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 NKX6-3A6NJ46 265 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 SULT2B1O00204 365 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
LIG3-202ENST00000378526 CKS1BP61024 79 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 OR1Q1Q15612 314 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 Q56UQ5 140 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 TMEM229BQ8NBD8 167 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 GAS2L1Q99501 681 aaPredicted RBP7.99□□□□□ -1.13
LIG3-202ENST00000378526 MGST2Q99735 147 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 ZNF716A6NP11 495 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 CXCL11O14625 94 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 LDB2O43679 373 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 NXPH2O95156 264 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 GHRHP01286 108 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 HBQ1P09105 142 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 LILRA4P59901 499 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 MLF2Q15773 248 aaPredicted RBP7.99□□□□□ -1.13
LIG3-202ENST00000378526 TMEM64Q6YI46 380 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 TCTN2Q96GX1 697 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 ZNF583Q96ND8 569 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 GUCD1Q96NT3 240 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 WIPI2Q9Y4P8 454 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 GASTP01350 101 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 HAPLN1P10915 354 aaPredicted RBP7.99□□□□□ -1.13
LIG3-202ENST00000378526 ZNF26P17031 533 aaPredicted RBP7.99□□□□□ -1.13
LIG3-202ENST00000378526 HRH1P35367 487 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 CLECL1Q8IZS7 167 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 ZDHHC8Q9ULC8 765 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 FUT9Q9Y231 359 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 ABCA6Q8N139 1617 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 C1QTNF9BB2RNN3 333 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 B4DGG1 531 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 HSPB6O14558 160 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 MANEAQ5SRI9 462 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 LAIR1Q6GTX8 287 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 OR8A1Q8NGG7 326 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 SMIM4Q8WVI0 70 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 C3orf30Q96M34 536 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 RNF2Q99496 336 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 FAM234AQ9H0X4 552 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 RCC2Q9P258 522 aaKnown RBP7.99□□□□□ -1.13
LIG3-202ENST00000378526 COX11Q9Y6N1 276 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 A0A1W2PPC4 97 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 TCRBV21S2A2A0A5A6 115 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 DHRS3O75911 302 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 GYPBP06028 91 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 GPR3P46089 330 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 OR1D5P58170 312 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 ID2Q02363 134 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 CALHM3Q86XJ0 350 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 FAM71CQ8NEG0 241 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 RAB7BQ96AH8 199 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 SPANXDQ9BXN6 97 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 TMEM167BQ9NRX6 74 aa7.99□□□□□ -1.13
LIG3-202ENST00000378526 TPRP12270 2363 aaKnown RBP7.99□□□□□ -1.13
LIG3-202ENST00000378526 PRAMEF11O60813 436 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 PLPP6Q8IY26 295 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 RNF175Q8N4F7 328 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 ARHGEF39Q8N4T4 335 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 ARRDC1Q8N5I2 433 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 OLIG1Q8TAK6 271 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 MRAP2Q96G30 205 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 RHOVQ96L33 236 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 STRADBQ9C0K7 418 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 GPR88Q9GZN0 384 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 PTGDR2Q9Y5Y4 395 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 DUOX1Q9NRD9 1551 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 TRAV27A0A087WT01 109 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 TCRBV5S4A2TA0A5A2 114 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 SRSF4Q08170 494 aaKnown RBP7.98□□□□□ -1.13
LIG3-202ENST00000378526 MISPQ8IVT2 679 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 OR10AG1Q8NH19 301 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 FBXO27Q8NI29 283 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 GALMQ96C23 342 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 SLC2A4RGQ9NR83 387 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 VAX2Q9UIW0 290 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 RTTNQ86VV8 2226 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 MEIKINA0A087WXM9 373 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 MFSD2BA6NFX1 497 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 KDM4EB2RXH2 506 aaPredicted RBP7.98□□□□□ -1.13
LIG3-202ENST00000378526 G3V2L1 256 aa7.98□□□□□ -1.13
LIG3-202ENST00000378526 SLC25A17O43808 307 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms