RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CALCBP10092 127 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 PTHLHP12272 177 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 RPL12P30050 165 aaKnown RBP10.67□□□□□ -0.7
NPHP4-202ENST00000378161 MEX3DQ86XN8 651 aaKnown RBP10.67□□□□□ -0.7
NPHP4-202ENST00000378161 VN1R17PQ8TDU5 208 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 STARD4Q96DR4 205 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 ACY3Q96HD9 319 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 LRFN3Q9BTN0 628 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 NOX4Q9NPH5 578 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 TRAV1-2A0A0B4J238 106 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 NDUFS4O43181 175 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 ASGR2P07307 311 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 CD79AP11912 226 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 MPZP25189 248 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 AOAHP28039 575 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 TSFMP43897 325 aaKnown RBP10.67□□□□□ -0.7
NPHP4-202ENST00000378161 ARFRP1Q13795 201 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 CLEC12BQ2HXU8 276 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 PGGHGQ32M88 737 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 MYPOPQ86VE0 399 aaPredicted RBP10.67□□□□□ -0.7
NPHP4-202ENST00000378161 SPNS2Q8IVW8 549 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 SGPP2Q8IWX5 399 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 OR52L2PQ8NGH6 319 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 SUN3Q8TAQ9 357 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 ORAI3Q9BRQ5 295 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 POLR1DQ9Y2S0 133 aa10.67□□□□□ -0.7
NPHP4-202ENST00000378161 CCDC187A0A096LP49 1063 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 AK4P27144 223 aaPredicted RBP10.66□□□□□ -0.7
NPHP4-202ENST00000378161 LPAR6P43657 344 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 SULT1A2P50226 295 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 RBX1P62877 108 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 LY6G5CQ5SRR4 150 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 TMEM173Q86WV6 379 aaPredicted RBP10.66□□□□□ -0.7
NPHP4-202ENST00000378161 IRF7Q92985 503 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 PPP1R14AQ96A00 147 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 PRAP1Q96NZ9 151 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 OR5B2Q96R09 309 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 SLC6A13Q9NSD5 602 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 ZNF337Q9Y3M9 751 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 ATAD5Q96QE3 1844 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 IFITM5A6NNB3 132 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 H3BSH0 61 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 KLK8O60259 260 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 OR5H8P0DN80 308 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 SELEP16581 610 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 MDKP21741 143 aaPredicted RBP10.66□□□□□ -0.7
NPHP4-202ENST00000378161 OCIAD2Q56VL3 154 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 ZNF343Q6P1L6 599 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 TMEM182Q6ZP80 229 aaPredicted RBP10.66□□□□□ -0.7
NPHP4-202ENST00000378161 TMEM104Q8NE00 496 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 OR4B1Q8NGF8 309 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 SGCZQ96LD1 299 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 DERL3Q96Q80 235 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 DMRTA2Q96SC8 542 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 LHX3Q9UBR4 397 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 RAB22AQ9UL26 194 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 COL5A3P25940 1745 aaPredicted RBP10.66□□□□□ -0.7
NPHP4-202ENST00000378161 B3GALT2O43825 422 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 SRMP19623 302 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 GPR4P46093 362 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 AGBL4Q5VU57 503 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 TMEM268Q5VZI3 342 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 KLHDC9Q8NEP7 349 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 CMTM2Q8TAZ6 248 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 OR10C1Q96KK4 312 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 CLUHP3Q96NS8 147 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 MTFP1Q9UDX5 166 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 MED31Q9Y3C7 131 aa10.66□□□□□ -0.7
NPHP4-202ENST00000378161 ZNF638Q14966 1978 aaKnown RBP10.66□□□□□ -0.7
NPHP4-202ENST00000378161 SOCS6O14544 535 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 GLCEO94923 617 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 IGHA1P01876 353 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 CTSEP14091 401 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 CD99P14209 185 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 ZNF28P17035 718 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 FCARP24071 287 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 CD70P32970 193 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 CD200R1LQ6Q8B3 271 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 MOB3AQ96BX8 217 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 SAMD8Q96LT4 415 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 IDSB3KWA1 339 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 SYPL1Q16563 259 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 LAS2Q8IYD9 372 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 DND1Q8IYX4 353 aaKnown RBP10.65□□□□□ -0.7
NPHP4-202ENST00000378161 MS4A4AQ96JQ5 239 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 PLEKHA1Q9HB21 404 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 MSL2Q9HCI7 577 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 ELOVL2Q9NXB9 296 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 SLC7A7Q9UM01 511 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 PPT2Q9UMR5 302 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 HEBP2Q9Y5Z4 205 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 STK17BO94768 372 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 APOA2P02652 100 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 BRS3P32247 399 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 ELOCQ15369 112 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 GRASPQ7Z6J2 395 aaPredicted RBP10.65□□□□□ -0.7
NPHP4-202ENST00000378161 OR4D9Q8NGE8 314 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 OR51L1Q8NGJ5 315 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 OR4C15Q8NGM1 316 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 ZBP1Q9H171 429 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms