RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TMEM100Q9NV29 134 aa16.05■□□□□ 0.16
CBWD3-204ENST00000377349 SOX21Q9Y651 276 aaPredicted RBP16.05■□□□□ 0.16
CBWD3-204ENST00000377349 TMEM178BH3BS89 294 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 M0R135 149 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 CD80P33681 288 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 MAGEA2P43356 314 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 MS4A2Q01362 244 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 PAX8Q06710 450 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 CRMP1Q14194 572 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 GK2Q14410 553 aaPredicted RBP16.04■□□□□ 0.16
CBWD3-204ENST00000377349 RBMS3Q6XE24 437 aaKnown RBP16.04■□□□□ 0.16
CBWD3-204ENST00000377349 RASSF6Q6ZTQ3 369 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 PGAP1Q75T13 922 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 ARHGAP24Q8N264 748 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 ZNRF4Q8WWF5 429 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 TAF15Q92804 592 aaKnown RBP eCLIP16.04■□□□□ 0.16
CBWD3-204ENST00000377349 ZNF799Q96GE5 643 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 ZMAT3Q9HA38 289 aaKnown RBP16.04■□□□□ 0.16
CBWD3-204ENST00000377349 CENPMQ9NSP4 180 aa16.04■□□□□ 0.16
CBWD3-204ENST00000377349 CEACAM18A8MTB9 384 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 H3BN98 237 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 MLNRO43193 412 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 RNASE1P07998 156 aaKnown RBP16.03■□□□□ 0.16
CBWD3-204ENST00000377349 IGHV4-38-2P0DP08 117 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 MDH2P40926 338 aaKnown RBP16.03■□□□□ 0.16
CBWD3-204ENST00000377349 HMGA2P52926 109 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 RAD23AP54725 363 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 MICAQ29983 383 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 RSPO1Q2MKA7 263 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-204ENST00000377349 ZNF770Q6IQ21 691 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-204ENST00000377349 DCXRQ7Z4W1 244 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 OR2T33Q8NG76 320 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 OR10G2Q8NGC3 310 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 OR4Q3Q8NH05 313 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 OR2AE1Q8NHA4 323 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 THTPAQ9BU02 230 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 PNRC2Q9NPJ4 139 aaKnown RBP16.03■□□□□ 0.16
CBWD3-204ENST00000377349 KCNG2Q9UJ96 466 aa16.03■□□□□ 0.16
CBWD3-204ENST00000377349 LRRC30A6NM36 301 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 RIIAD1A6NNX1 92 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 IQCF6A8MYZ5 107 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 GNGT2O14610 69 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 IFNGP01579 166 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 WNT2P09544 360 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 CLUP10909 449 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 IRF2P14316 349 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 RPS2P15880 293 aaKnown RBP16.02■□□□□ 0.16
CBWD3-204ENST00000377349 FMO3P31513 532 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 BAMBIQ13145 260 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 ESCO2Q56NI9 601 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 C9orf139Q6ZV77 190 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 IQCF1Q8N6M8 205 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 ZNF511Q8NB15 262 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 TEX47Q8TBZ9 253 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 SLC30A2Q9BRI3 323 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 UFSP2Q9NUQ7 469 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 IL20Q9NYY1 176 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 PRPF19Q9UMS4 504 aaKnown RBP16.02■□□□□ 0.16
CBWD3-204ENST00000377349 COMMD3-BMI1R4GMX3 469 aa16.02■□□□□ 0.16
CBWD3-204ENST00000377349 CLDN34H7C241 214 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 CST1P01037 141 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 SLC2A1P11166 492 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 PSKH1P11801 424 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 POU1F1P28069 291 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 PRKXP51817 358 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 SLC9A3R2Q15599 337 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 SNAI3Q3KNW1 292 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 MUC20Q8N307 709 aaPredicted RBP16.02■□□□□ 0.15
CBWD3-204ENST00000377349 BOLLQ8N9W6 283 aaKnown RBP16.02■□□□□ 0.15
CBWD3-204ENST00000377349 OR10S1Q8NGN2 331 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 ASB9Q96DX5 294 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 MRI1Q9BV20 369 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 MED20Q9H944 212 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 UNKLQ9H9P5 680 aaKnown RBP16.02■□□□□ 0.15
CBWD3-204ENST00000377349 TMEM165Q9HC07 324 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 OR5V1Q9UGF6 321 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 LRCH1Q9Y2L9 728 aa16.02■□□□□ 0.15
CBWD3-204ENST00000377349 GGT3PA6NGU5 568 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 PLATP00750 562 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 PPIAL4GP0DN37 164 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 T-ENOLP0DO92 83 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 RAP2AP10114 183 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 ZNF3P17036 446 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 SPI1P17947 270 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 CA6P23280 308 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 ENTPD1P49961 510 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 OR8G1Q15617 311 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 FAM201AQ5SY85 155 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 PRAMEF6Q5VXH4 476 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 PARP8Q8N3A8 854 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 C19orf18Q8NEA5 215 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 UPRTQ96BW1 309 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 SLAMF6Q96DU3 332 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 NIPSNAP1Q9BPW8 284 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 BAIAP2Q9UQB8 552 aa16.01■□□□□ 0.15
CBWD3-204ENST00000377349 IGHV3OR16-10A0A075B7F0 116 aa16■□□□□ 0.15
CBWD3-204ENST00000377349 FAM183AA6NL82 134 aa16■□□□□ 0.15
CBWD3-204ENST00000377349 ZNF593O00488 134 aaPredicted RBP16■□□□□ 0.15
CBWD3-204ENST00000377349 TBX1O43435 398 aa16■□□□□ 0.15
CBWD3-204ENST00000377349 KRTAP27-1Q3LI81 207 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms