RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ZNF93P35789 620 aaPredicted RBP22.46■■□□□ 1.19
C9orf40-201ENST00000376854 MYBPHQ13203 477 aa22.46■■□□□ 1.19
C9orf40-201ENST00000376854 ZNF529Q6P280 563 aa22.46■■□□□ 1.19
C9orf40-201ENST00000376854 ACOT7LQ6ZUV0 252 aa22.46■■□□□ 1.19
C9orf40-201ENST00000376854 DTWD2Q8NBA8 298 aa22.46■■□□□ 1.19
C9orf40-201ENST00000376854 CASTOR1Q8WTX7 329 aa22.46■■□□□ 1.19
C9orf40-201ENST00000376854 ZNF75AQ96N20 296 aa22.46■■□□□ 1.19
C9orf40-201ENST00000376854 ZNF471Q9BX82 626 aaPredicted RBP22.46■■□□□ 1.19
C9orf40-201ENST00000376854 SEC61A2Q9H9S3 476 aa22.46■■□□□ 1.19
C9orf40-201ENST00000376854 PPP4R1LQ9P1A2 415 aa22.46■■□□□ 1.19
C9orf40-201ENST00000376854 POLR1DQ9Y2S0 133 aa22.46■■□□□ 1.19
C9orf40-201ENST00000376854 CEP192Q8TEP8 1941 aa22.45■■□□□ 1.19
C9orf40-201ENST00000376854 CFAP54Q96N23 3096 aa22.45■■□□□ 1.19
C9orf40-201ENST00000376854 IFNA6P05013 189 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 CLRN1P58418 232 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 THEM4Q5T1C6 240 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 FAHD2BQ6P2I3 314 aaPredicted RBP22.45■■□□□ 1.18
C9orf40-201ENST00000376854 WDR74Q6RFH5 385 aaPredicted RBP22.45■■□□□ 1.18
C9orf40-201ENST00000376854 RTN4RL2Q86UN3 420 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 ADAD2Q8NCV1 583 aaKnown RBP22.45■■□□□ 1.18
C9orf40-201ENST00000376854 FAHD2AQ96GK7 314 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 C12orf4Q9NQ89 552 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 TMEM14DPA8MWL7 114 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 TRIM77I1YAP6 450 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 SSX5O60225 188 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 ERCC1P07992 297 aaPredicted RBP22.45■■□□□ 1.18
C9orf40-201ENST00000376854 AKR1C4P17516 323 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 ZNF101Q8IZC7 436 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 SPACA5Q96QH8 159 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 LDAHQ9H6V9 325 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 LHFPL6Q9Y693 200 aa22.45■■□□□ 1.18
C9orf40-201ENST00000376854 PMP2P02689 132 aa22.44■■□□□ 1.18
C9orf40-201ENST00000376854 OPN1LWP04000 364 aa22.44■■□□□ 1.18
C9orf40-201ENST00000376854 CASRP41180 1078 aa22.44■■□□□ 1.18
C9orf40-201ENST00000376854 GSK3AP49840 483 aa22.44■■□□□ 1.18
C9orf40-201ENST00000376854 MOB3CQ70IA8 216 aa22.44■■□□□ 1.18
C9orf40-201ENST00000376854 KCTD9Q7L273 389 aa22.44■■□□□ 1.18
C9orf40-201ENST00000376854 UEVLDQ8IX04 471 aa22.44■■□□□ 1.18
C9orf40-201ENST00000376854 SLC38A9Q8NBW4 561 aa22.44■■□□□ 1.18
C9orf40-201ENST00000376854 NICN1Q9BSH3 213 aa22.44■■□□□ 1.18
C9orf40-201ENST00000376854 FBLN5Q9UBX5 448 aa22.44■■□□□ 1.18
C9orf40-201ENST00000376854 PISDQ9UG56 409 aa22.44■■□□□ 1.18
C9orf40-201ENST00000376854 ETV2O00321 342 aaPredicted RBP22.43■■□□□ 1.18
C9orf40-201ENST00000376854 PRKXP51817 358 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 EMP2P54851 167 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 ZNF273Q14593 569 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 RNF144BQ7Z419 303 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 COMMD2Q86X83 199 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 OR2AJ1Q8NGZ0 328 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 MRGPRX4Q96LA9 322 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 NUDT16L1Q9BRJ7 211 aaKnown RBP22.43■■□□□ 1.18
C9orf40-201ENST00000376854 BARX1Q9HBU1 254 aaPredicted RBP22.43■■□□□ 1.18
C9orf40-201ENST00000376854 IGLV3-12A0A075B6K2 115 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 EFSO43281 561 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 TBPP20226 339 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 PTCRAQ6ISU1 281 aaPredicted RBP22.43■■□□□ 1.18
C9orf40-201ENST00000376854 TMPRSS9Q7Z410 1059 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 THAP6Q8TBB0 222 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 DNTTIP1Q9H147 329 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 SDHAF3Q9NRP4 125 aa22.43■■□□□ 1.18
C9orf40-201ENST00000376854 ZNF878C9JN71 531 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 TNRC18O15417 2968 aaPredicted RBP22.42■■□□□ 1.18
C9orf40-201ENST00000376854 APOC3P02656 99 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 ABOP16442 354 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 CDAP32320 146 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 FOXK1P85037 733 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 SMAD2Q15796 467 aaKnown RBP22.42■■□□□ 1.18
C9orf40-201ENST00000376854 PLPPR5Q32ZL2 321 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 NOXO1Q8NFA2 376 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 PHYHIPLQ96FC7 376 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 MOB1AQ9H8S9 216 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 FN3KRPQ9HA64 309 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 TAS2R3Q9NYW6 316 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 MRPS17Q9Y2R5 130 aaKnown RBP22.42■■□□□ 1.18
C9orf40-201ENST00000376854 BCAT2O15382 392 aaPredicted RBP22.42■■□□□ 1.18
C9orf40-201ENST00000376854 IGHG1P01857 330 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 SLC2A1P11166 492 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 NKAIN1Q4KMZ8 207 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 ELP2Q6IA86 826 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 GLIPR1L1Q6UWM5 242 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 RABEPKQ7Z6M1 372 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 OR4K15Q8NH41 348 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 POC1BQ8TC44 478 aa22.42■■□□□ 1.18
C9orf40-201ENST00000376854 EEF1E1-BLOC1S5C9J1V9 151 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 DUS4LO95620 317 aaKnown RBP22.41■■□□□ 1.18
C9orf40-201ENST00000376854 PGA4P0DJD7 388 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 PGA3P0DJD8 388 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 ABHD12BQ7Z5M8 362 aaPredicted RBP22.41■■□□□ 1.18
C9orf40-201ENST00000376854 OR2I1PQ8NGU4 316 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 RNF138Q8WVD3 245 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 LPAR5Q9H1C0 372 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 MRPS28Q9Y2Q9 187 aaKnown RBP22.41■■□□□ 1.18
C9orf40-201ENST00000376854 NUPL2O15504 423 aaKnown RBP22.41■■□□□ 1.18
C9orf40-201ENST00000376854 CNR1P21554 472 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 MFAP5Q13361 173 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 SLC25A53Q5H9E4 307 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 CARD17Q5XLA6 110 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 OR2W3Q7Z3T1 314 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 INO80EQ8NBZ0 244 aaPredicted RBP22.41■■□□□ 1.18
C9orf40-201ENST00000376854 MARCH1Q8TCQ1 289 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms