RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 OR5M8Q8NGP6 311 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 OR1S1Q8NH92 325 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 CMBLQ96DG6 245 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 CXorf58Q96LI9 332 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 SFXN2Q96NB2 322 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 ATG5Q9H1Y0 275 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 UBQLN2Q9UHD9 624 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 NPIPA1Q9UND3 350 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 TRAV20A0A0B4J274 112 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 TMEM269A0A1B0GVZ9 245 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 RAB19A4D1S5 217 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 RNF222A6NCQ9 220 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 STMND1H3BQB6 276 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF84P51523 738 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 ACTBP60709 375 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 TSPAN5P62079 268 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 ACTG1P63261 375 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 WDR5BQ86VZ2 330 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 FAM89BQ8N5H3 189 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 ZIC4Q8N9L1 334 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 GALNT11Q8NCW6 608 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 OR2I1PQ8NGU4 316 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 NICN1Q9BSH3 213 aa8.46□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF98A6NK75 572 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 OR2AT4A6NND4 320 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 M0QYG6 137 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 ZIC3O60481 467 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 DCNP07585 359 aaKnown RBP8.46□□□□□ -1.06
TRIM39-202ENST00000376659 GTF2F2P13984 249 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 NTF4P34130 210 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 C4orf46Q504U0 113 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 TMEM244Q5VVB8 128 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 TMUB2Q71RG4 321 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 LUZP2Q86TE4 346 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 PEG10Q86TG7 708 aaKnown RBP8.46□□□□□ -1.06
TRIM39-202ENST00000376659 EIF4E3Q8N5X7 224 aaKnown RBP8.46□□□□□ -1.06
TRIM39-202ENST00000376659 OR14K1Q8NGZ2 314 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 THAP3Q8WTV1 239 aaPredicted RBP8.46□□□□□ -1.06
TRIM39-202ENST00000376659 ANGPTL4Q9BY76 406 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 PFDN2Q9UHV9 154 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 TMEM235A6NFC5 223 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 HLA-DQA2P01906 255 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 SLC25A4P12235 298 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 PPP3CBP16298 524 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 CDAP32320 146 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 TMEM50BP56557 158 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 DNM1P34Q6PK57 102 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 SLC16A14Q7RTX9 510 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 FJX1Q86VR8 437 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 GTPBP8Q8N3Z3 284 aaPredicted RBP8.46□□□□□ -1.06
TRIM39-202ENST00000376659 OR6K3Q8NGY3 331 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 TMEM230Q96A57 120 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 FGGYQ96C11 551 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 FOXRED1Q96CU9 486 aaPredicted RBP8.46□□□□□ -1.06
TRIM39-202ENST00000376659 RAB22AQ9UL26 194 aa8.46□□□□□ -1.06
TRIM39-202ENST00000376659 RFPL4AA6NLU0 287 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 RFPL4AL1F8VTS6 287 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 I3L521 148 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 MFNGO00587 321 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 GOSR2O14653 212 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 PDGFAP04085 211 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 FGF2P09038 288 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 RPS2P15880 293 aaKnown RBP8.45□□□□□ -1.06
TRIM39-202ENST00000376659 BDKRB2P30411 391 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 RIPPLY1Q0D2K3 151 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 DHRS2Q13268 280 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 JMJD6Q6NYC1 403 aaPredicted RBP8.45□□□□□ -1.06
TRIM39-202ENST00000376659 OR2W3Q7Z3T1 314 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 COMMD7Q86VX2 200 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 LHFPL1Q86WI0 220 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 ARL6IP6Q8N6S5 226 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 GVQW1Q8N7I0 195 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 OR4S1Q8NGB4 309 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 FBXW5Q969U6 566 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 SGK3Q96BR1 496 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 ELMOD3Q96FG2 381 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 SLC25A21Q9BQT8 299 aaPredicted RBP8.45□□□□□ -1.06
TRIM39-202ENST00000376659 DUSP23Q9BVJ7 150 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF175Q9Y473 711 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 ALPK2Q86TB3 2170 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 A0A1W2PPL8 197 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 MEGF11A6BM72 1044 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF878C9JN71 531 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 PRSS44E7EML9 344 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 TERTO14746 1132 aaKnown RBP8.45□□□□□ -1.06
TRIM39-202ENST00000376659 LYL1P12980 280 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 IGFBP4P22692 258 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF345Q14585 488 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 TSSK4Q6SA08 328 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 OVCH2Q7RTZ1 564 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.45□□□□□ -1.06
TRIM39-202ENST00000376659 OR8H3Q8N146 312 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 TMEM104Q8NE00 496 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 PCNPQ8WW12 178 aaKnown RBP8.45□□□□□ -1.06
TRIM39-202ENST00000376659 ZBTB8AQ96BR9 441 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 GSX2Q9BZM3 304 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 CDV3Q9UKY7 258 aaKnown RBP8.45□□□□□ -1.06
TRIM39-202ENST00000376659 FRYQ5TBA9 3013 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 A0A1W2PNR3 127 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 F5H5P2 479 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms