RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 TMEM269A0A1B0GVZ9 245 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 SNRPGP15A8MWD9 76 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 EIF1AYO14602 144 aaKnown RBP12.42□□□□□ -0.42
MSH5-202ENST00000375740 SFTPDP35247 375 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 P2RY4P51582 365 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 SCAND1P57086 179 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 MRPS10P82664 201 aaKnown RBP12.42□□□□□ -0.42
MSH5-202ENST00000375740 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.42□□□□□ -0.42
MSH5-202ENST00000375740 UEVLDQ8IX04 471 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 OR2AK2Q8NG84 335 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 TINAGL1Q9GZM7 467 aaPredicted RBP12.42□□□□□ -0.42
MSH5-202ENST00000375740 ZNF700Q9H0M5 742 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 SMOC1Q9H4F8 434 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 TAS2R4Q9NYW5 299 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 ZNF814B7Z6K7 855 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 ACOT7O00154 380 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 XRCC3O43542 346 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 IL5P05113 134 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 CRYBA1P05813 215 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 H2BFMP0C1H6 154 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 COX6A1P12074 109 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 POU3F4P49335 361 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 RAB11BQ15907 218 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 LPAL2Q16609 132 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 SWI5Q1ZZU3 235 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 TMEM176BQ3YBM2 270 aaPredicted RBP12.41□□□□□ -0.42
MSH5-202ENST00000375740 MOB3CQ70IA8 216 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 FAM3DQ96BQ1 224 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 PTGES2Q9H7Z7 377 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 TINAGQ9UJW2 476 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 HS3ST3B1Q9Y662 390 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 TRBV23-1A0A0A0MS06 115 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 TRAV14DV4A0A0A6YYC5 116 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 NAP1L6A6NFF2 107 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 SLC17A2O00624 439 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 SGCEO43556 437 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 CD2P06729 351 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 FABP1P07148 127 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 GP1BAP07359 652 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 CBR1P16152 277 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 IGFBP3P17936 291 aaPredicted RBP12.41□□□□□ -0.42
MSH5-202ENST00000375740 CNR1P21554 472 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 CFPP27918 469 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 RFC3P40938 356 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 EIF1AXP47813 144 aaKnown RBP12.41□□□□□ -0.42
MSH5-202ENST00000375740 AP3S2P59780 193 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 SRSF3P84103 164 aaKnown RBP12.41□□□□□ -0.42
MSH5-202ENST00000375740 ANKRD16Q6P6B7 361 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 DEGS2Q6QHC5 323 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 BIVMQ86UB2 503 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 OR10H5Q8NGA6 315 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 OR1S2Q8NGQ3 325 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 OR1J4Q8NGS1 313 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 OR13C3Q8NGS6 347 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 C15orf40Q8WUR7 153 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 SLC25A44Q96H78 314 aaPredicted RBP12.41□□□□□ -0.42
MSH5-202ENST00000375740 GSN-AS1Q9NRJ2 163 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 CKLFQ9UBR5 152 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 HHLA2Q9UM44 414 aa12.41□□□□□ -0.42
MSH5-202ENST00000375740 LOC101059948A0A1B0GTJ6 334 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 C9J4A7 227 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 LMX1BO60663 402 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 RAMP1O60894 148 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 CTAG2O75638 210 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 LUMP51884 338 aaPredicted RBP12.4□□□□□ -0.42
MSH5-202ENST00000375740 CLRN1P58418 232 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 THEM4Q5T1C6 240 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 OLFML2AQ68BL7 652 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 FAM166AQ6J272 317 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 SLC23A3Q6PIS1 610 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 RNF133Q8WVZ7 376 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 CDV3Q9UKY7 258 aaKnown RBP12.4□□□□□ -0.42
MSH5-202ENST00000375740 LOC107986453A0A1B0GWG9 222 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 MASP2O00187 686 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 SULT1C2O00338 296 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 ISG15P05161 165 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 KLK2P20151 261 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 LAP3P28838 519 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 DNASE1L1P49184 302 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 STARP49675 285 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 EXT1Q16394 746 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 CARD17Q5XLA6 110 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 C11orf88Q6PI97 169 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 OPN5Q6U736 354 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 DNM1P46Q6ZS02 220 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 TMEM17Q86X19 198 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 CCDC36Q8IYA8 594 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 C12orf45Q8N5I9 185 aaPredicted RBP12.4□□□□□ -0.42
MSH5-202ENST00000375740 ADPRHL1Q8NDY3 354 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 OR1M1Q8NGA1 313 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 GLYATL2Q8WU03 294 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 SLAMF6Q96DU3 332 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 UTP23Q9BRU9 249 aaKnown RBP12.4□□□□□ -0.42
MSH5-202ENST00000375740 TMEM138Q9NPI0 162 aa12.4□□□□□ -0.42
MSH5-202ENST00000375740 LOC100289279A0A1B0GTE1 492 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 TMEM218A2RU14 115 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 TTLL8A6PVC2 850 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 P2RY10O00398 339 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 TRAF3IP2O43734 574 aaPredicted RBP12.39□□□□□ -0.43
MSH5-202ENST00000375740 PGA4P0DJD7 388 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms