RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 RBPMSQ93062 196 aaKnown RBP12.38□□□□□ -0.43
HMGCL-203ENST00000374490 FAHD2AQ96GK7 314 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 OXGR1Q96P68 337 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 NPAS1Q99742 590 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 CRB3Q9BUF7 120 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 TINAGL1Q9GZM7 467 aaPredicted RBP12.38□□□□□ -0.43
HMGCL-203ENST00000374490 CNTD2Q9H8S5 307 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 B3GAT1Q9P2W7 334 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 NXT1Q9UKK6 140 aaKnown RBP12.38□□□□□ -0.43
HMGCL-203ENST00000374490 KLK13Q9UKR3 277 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 PLEKHA6Q9Y2H5 1048 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 HDGFL3Q9Y3E1 203 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 H3BML4 177 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 M0QYG6 137 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 EIF1AYO14602 144 aaKnown RBP12.37□□□□□ -0.43
HMGCL-203ENST00000374490 TP53I11O14683 189 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 TLX3O43711 291 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-203ENST00000374490 SIX6O95475 246 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 CD8AP01732 235 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 PGA4P0DJD7 388 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 PGA3P0DJD8 388 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 CLDN6P56747 220 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 C2orf68Q2NKX9 166 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 ATPAF1Q5TC12 328 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-203ENST00000374490 GSG1LQ6UXU4 331 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 PGAP1Q75T13 922 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 SLC51BQ86UW2 128 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 OR6K3Q8NGY3 331 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 B3GNT4Q9C0J1 378 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 ARL6Q9H0F7 186 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 PTGES2Q9H7Z7 377 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 RDH8Q9NYR8 311 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 PFDN2Q9UHV9 154 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 CFAP47Q6ZTR5 3102 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 A0A087WZY1 265 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 A0A0D9SG52 128 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 A0A1B0GTI1 187 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 TMEM235A6NFC5 223 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 RAB27BO00194 218 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF883P0CG24 379 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 UBBP0CG47 229 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 ENPP1P22413 925 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 CD34P28906 385 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 RPS27AP62979 156 aaKnown RBP12.37□□□□□ -0.43
HMGCL-203ENST00000374490 UBA52P62987 128 aaKnown RBP12.37□□□□□ -0.43
HMGCL-203ENST00000374490 GRB2P62993 217 aaKnown RBP12.37□□□□□ -0.43
HMGCL-203ENST00000374490 TAF13Q15543 124 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 FAM69BQ5VUD6 431 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 DCAF12L2Q5VW00 463 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 TMEM65Q6PI78 240 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 SLC25A47Q6Q0C1 308 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 CORO6Q6QEF8 472 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 RFPL4BQ6ZWI9 263 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 TRAPPC6BQ86SZ2 158 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 FJX1Q86VR8 437 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 SLC38A9Q8NBW4 561 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 ACBD4Q8NC06 268 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 STEAP2Q8NFT2 490 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 OR4K17Q8NGC6 315 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 OR5M8Q8NGP6 311 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 OR1J2Q8NGS2 313 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 SPACA9Q96E40 222 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-203ENST00000374490 SPSB2Q99619 263 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 DEFB126Q9BYW3 111 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 CHST6Q9GZX3 395 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 MFFQ9GZY8 342 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 CDCP1Q9H5V8 836 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 IFT46Q9NQC8 304 aa12.37□□□□□ -0.43
HMGCL-203ENST00000374490 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
HMGCL-203ENST00000374490 TMA7Q9Y2S6 64 aaKnown RBP12.37□□□□□ -0.43
HMGCL-203ENST00000374490 TMEM14DPA8MWL7 114 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 TRAF3IP2O43734 574 aaPredicted RBP12.36□□□□□ -0.43
HMGCL-203ENST00000374490 EFNA2O43921 213 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 LMX1BO60663 402 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 HLA-GP17693 338 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 P2RY4P51582 365 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 SLC35A1P78382 337 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 QRFPP83859 136 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 MOGAT2Q3SYC2 334 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 CDNFQ49AH0 187 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 ACTBL2Q562R1 376 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 TMEM81Q6P7N7 255 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 TMED4Q7Z7H5 227 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 LYG2Q86SG7 212 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 SLC25A42Q86VD7 318 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 PPP1R3BQ86XI6 285 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 WDFY1Q8IWB7 410 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 FADS6Q8N9I5 356 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 OR52N4Q8NGI2 321 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 OR10S1Q8NGN2 331 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 OR13C8Q8NGS7 320 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 ZBTB8AQ96BR9 441 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 ADAT3Q96EY9 351 aaPredicted RBP12.36□□□□□ -0.43
HMGCL-203ENST00000374490 EMC6Q9BV81 110 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF224Q9NZL3 707 aa12.36□□□□□ -0.43
HMGCL-203ENST00000374490 ZSCAN5BA6NJL1 495 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF726A6NNF4 738 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 D6RAR5 112 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 OR2J2O76002 312 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 TIAF1O95411 115 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms