RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 TNFSF10P50591 281 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 AP3S2P59780 193 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 TNK1Q13470 666 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 GSG1Q2KHT4 349 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 OR52N4Q8NGI2 321 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 ROBO4Q8WZ75 1007 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 MED30Q96HR3 178 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 SOX7Q9BT81 388 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 ACTR6Q9GZN1 396 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 DHRS3O75911 302 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 CD74P04233 296 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 ERCC1P07992 297 aaPredicted RBP11□□□□□ -0.65
PRPF4-202ENST00000374199 MADCAM1Q13477 382 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 CCDC157Q569K6 752 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 IZUMO1Q8IYV9 350 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 DTX3Q8N9I9 347 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 CRLF2Q9HC73 371 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 GPR84Q9NQS5 396 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 RAB22AQ9UL26 194 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 RAB27BO00194 218 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 COX5BP10606 129 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 WT1P19544 449 aaPredicted RBP10.99□□□□□ -0.65
PRPF4-202ENST00000374199 RRAS2P62070 204 aaPredicted RBP10.99□□□□□ -0.65
PRPF4-202ENST00000374199 OC90Q02509 493 aaPredicted RBP10.99□□□□□ -0.65
PRPF4-202ENST00000374199 ZNF57Q68EA5 555 aaPredicted RBP10.99□□□□□ -0.65
PRPF4-202ENST00000374199 AAED1Q7RTV5 226 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 FAM89BQ8N5H3 189 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 ABHD3Q8WU67 409 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 WDYHV1Q96HA8 205 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 CHST5Q9GZS9 411 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 WNT5BQ9H1J7 359 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 SLCO5A1Q9H2Y9 848 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 PLSCR2Q9NRY7 297 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 PLA2G3Q9NZ20 509 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 KLK11Q9UBX7 282 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 INMT-MINDY4F8WBC2 141 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 GSTT2BP0CG30 244 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 RAB3AP20336 220 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 RNPS1Q15287 305 aaKnown RBP10.99□□□□□ -0.65
PRPF4-202ENST00000374199 ZNF260Q3ZCT1 412 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 RNFT1Q5M7Z0 435 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 ASCL4Q6XD76 172 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 OR52H1Q8NGJ2 320 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 PRDM14Q9GZV8 571 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 EXO5Q9H790 373 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 TAS2R8Q9NYW2 309 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 BSNQ9UPA5 3926 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 A0A0A6YYJ9 748 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 A0A1B0GVI7 797 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 GMDSO60547 372 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 TGM6O95932 706 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 EIF1AXP47813 144 aaKnown RBP10.99□□□□□ -0.65
PRPF4-202ENST00000374199 ATP1A1-AS1Q5TC04 95 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 OR56B4Q8NH76 319 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 PP6455Q8WZ26 134 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 SEH1LQ96EE3 360 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 ZFP3Q96NJ6 502 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 FOXB1Q99853 325 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 OR2H1Q9GZK4 316 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 KCNK15Q9H427 330 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 MOV10Q9HCE1 1003 aaKnown RBP10.99□□□□□ -0.65
PRPF4-202ENST00000374199 MED13Q9UHV7 2174 aa10.99□□□□□ -0.65
PRPF4-202ENST00000374199 CCNKO75909 580 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 SCGNO76038 276 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 KDM4BO94953 1096 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 VSIG8P0DPA2 414 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 NCCRP1Q6ZVX7 275 aaPredicted RBP10.98□□□□□ -0.65
PRPF4-202ENST00000374199 OR1F12Q8NHA8 337 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 C1QTNF5Q9BXJ0 243 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 SLC6A15Q9H2J7 730 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 GHRLQ9UBU3 117 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 CGGBP1Q9UFW8 167 aaPredicted RBP10.98□□□□□ -0.65
PRPF4-202ENST00000374199 CENPXA8MT69 81 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 ICMTO60725 284 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 CSF1P09603 554 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 NAT1P18440 290 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 SPOCK1Q08629 439 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 SCRN3Q0VDG4 424 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 SNTB2Q13425 540 aaKnown RBP10.98□□□□□ -0.65
PRPF4-202ENST00000374199 FGD2Q7Z6J4 655 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 RGCCQ9H4X1 137 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 MYOZ1Q9NP98 299 aaPredicted RBP10.98□□□□□ -0.65
PRPF4-202ENST00000374199 NPDC1Q9NQX5 325 aaPredicted RBP10.98□□□□□ -0.65
PRPF4-202ENST00000374199 DIABLOQ9NR28 239 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 B3GNT2Q9NY97 397 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 DLL3Q9NYJ7 618 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 SPRR3Q9UBC9 169 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 CLEC4AQ9UMR7 237 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 ZNF175Q9Y473 711 aa10.98□□□□□ -0.65
PRPF4-202ENST00000374199 RGS13O14921 159 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 TRAPPC6AO75865 159 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 NDUFB6O95139 128 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 LPLP06858 475 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 CD46P15529 392 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 EIF2B2P49770 351 aaKnown RBP10.97□□□□□ -0.65
PRPF4-202ENST00000374199 PSG4Q00888 419 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 CLN3Q13286 438 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 TGIF1Q15583 401 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 OR8B8Q15620 311 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 SGCAQ16586 387 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms