RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 IL15RAQ13261 267 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 ISXQ2M1V0 245 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF260Q3ZCT1 412 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 TMEM225Q6GV28 225 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 SLC8B1Q6J4K2 584 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 RPUSD3Q6P087 351 aaKnown RBP11.56□□□□□ -0.56
PRPF4-201ENST00000374198 CLEC18BQ6UXF7 455 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 NRSN1Q8IZ57 195 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 EXD3Q8N9H8 876 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 OR10J5Q8NHC4 309 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 CMKLR1Q99788 373 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 METTL8Q9H825 291 aaKnown RBP11.56□□□□□ -0.56
PRPF4-201ENST00000374198 CGGBP1Q9UFW8 167 aaPredicted RBP11.56□□□□□ -0.56
PRPF4-201ENST00000374198 WIPF3A6NGB9 483 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF25P17030 456 aaPredicted RBP11.55□□□□□ -0.56
PRPF4-201ENST00000374198 RPL12P30050 165 aaKnown RBP11.55□□□□□ -0.56
PRPF4-201ENST00000374198 CD200P41217 278 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 TCEAL5Q5H9L2 206 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 OPN5Q6U736 354 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 LRRC25Q8N386 305 aaPredicted RBP11.55□□□□□ -0.56
PRPF4-201ENST00000374198 HPSE2Q8WWQ2 592 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 R3HDM4Q96D70 268 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF514Q96K75 400 aaPredicted RBP11.55□□□□□ -0.56
PRPF4-201ENST00000374198 SLC25A31Q9H0C2 315 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 GSKIPQ9P0R6 139 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 LUZP4Q9P127 313 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 IL36AQ9UHA7 158 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 MYO7AQ13402 2215 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 NUDT21O43809 227 aaKnown RBP11.55□□□□□ -0.56
PRPF4-201ENST00000374198 TRGC1P0CF51 173 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 ERVFRD-1P60508 538 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 LINC01555Q8NAE3 123 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 SUMF2Q8NBJ7 301 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 OR13C9Q8NGT0 318 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 NELFAQ9H3P2 528 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 C19orf12Q9NSK7 152 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 OR14J1Q9UGF5 321 aa11.55□□□□□ -0.56
PRPF4-201ENST00000374198 A0A087WWC5 75 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 TGIF2-C20orf24A0A0A6YYL0 155 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 K7EPK0 472 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 CYB5BO43169 146 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 BRINP1O60477 761 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 GZMBP10144 247 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 FCGR2CP31995 323 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 CAMLGP49069 296 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 SLC25A1P53007 311 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 EGR3Q06889 387 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 SPEM2Q0P670 501 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 ANKRD55Q3KP44 614 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 LINC00114Q6XXX2 140 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 LANCL3Q6ZV70 420 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 FOXRED2Q8IWF2 684 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF679Q8IYX0 411 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF101Q8IZC7 436 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 SLC39A11Q8N1S5 342 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 KDM8Q8N371 416 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 FAM71E2Q8N5Q1 922 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 TMEM104Q8NE00 496 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 TERB2Q8NHR7 220 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 ABHD5Q8WTS1 349 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 NKD1Q969G9 470 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 TMEM230Q96A57 120 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 INTS14Q96SY0 518 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 IGFLR1Q9H665 355 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 MKKSQ9NPJ1 570 aaPredicted RBP11.54□□□□□ -0.56
PRPF4-201ENST00000374198 GTF2A1LQ9UNN4 478 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 URGCP-MRPS24S4R325 110 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 TICRRQ7Z2Z1 1910 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 A0A087WZY1 265 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 DVL1O14640 695 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 GALTP07902 379 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 TAGLN2P37802 199 aaKnown RBP11.54□□□□□ -0.56
PRPF4-201ENST00000374198 FHITP49789 147 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 TMEM33P57088 247 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 PRDX1Q06830 199 aaKnown RBP11.54□□□□□ -0.56
PRPF4-201ENST00000374198 HNF4GQ14541 408 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 SLC10A1Q14973 349 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 TPGS2Q68CL5 300 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 ASTLQ6HA08 431 aaPredicted RBP11.54□□□□□ -0.56
PRPF4-201ENST00000374198 CARFQ8N187 725 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 GPR137CQ8N3F9 429 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 LRRC18Q8N456 261 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 COX18Q8N8Q8 333 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 OR14K1Q8NGZ2 314 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 SMIM3Q9BZL3 60 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 TCEAL2Q9H3H9 227 aaPredicted RBP11.54□□□□□ -0.56
PRPF4-201ENST00000374198 C5orf66Q9H5L9 145 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 SRA1Q9HD15 236 aaKnown RBP11.54□□□□□ -0.56
PRPF4-201ENST00000374198 CKLFQ9UBR5 152 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 GPR34Q9UPC5 381 aa11.54□□□□□ -0.56
PRPF4-201ENST00000374198 TBPP20226 339 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 ALOX5APP20292 161 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 RPS27P42677 84 aaKnown RBP11.53□□□□□ -0.56
PRPF4-201ENST00000374198 ACAA2P42765 397 aaKnown RBP11.53□□□□□ -0.56
PRPF4-201ENST00000374198 SLC35A1P78382 337 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 NTHL1P78549 312 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 PLPP4Q5VZY2 271 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 SLC22A25Q6T423 547 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 DCXRQ7Z4W1 244 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 PRR18Q8N4B5 295 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms