RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 SNIP1Q8TAD8 396 aaKnown RBP13.73□□□□□ -0.21
HDAC8-209ENST00000373589 YIPF5Q969M3 257 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 FOXRED1Q96CU9 486 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-209ENST00000373589 TMEM138Q9NPI0 162 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 CGGBP1Q9UFW8 167 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-209ENST00000373589 MRPS7Q9Y2R9 242 aaKnown RBP13.73□□□□□ -0.21
HDAC8-209ENST00000373589 PRRC2CQ9Y520 2896 aaKnown RBP13.73□□□□□ -0.21
HDAC8-209ENST00000373589 EEF1E1O43324 174 aaKnown RBP13.73□□□□□ -0.21
HDAC8-209ENST00000373589 TPPPO94811 219 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 FCGR2AP12318 317 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 ABOP16442 354 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 ZNF20P17024 532 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 AGTR1P30556 359 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 PTH2RP49190 550 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 TPTEP56180 551 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 AKR7LQ8NHP1 331 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 FAM71F1Q96KD3 344 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-209ENST00000373589 ZFP3Q96NJ6 502 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 TAAR6Q96RI8 345 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 NKX3-1Q99801 234 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-209ENST00000373589 SCNM1Q9BWG6 230 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 ZNF224Q9NZL3 707 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 CLCF1Q9UBD9 225 aa13.73□□□□□ -0.21
HDAC8-209ENST00000373589 SULT1B1O43704 296 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 SLC34A2O95436 690 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 RAB3AP20336 220 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 CDK2P24941 298 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 FOXG1P55316 489 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-209ENST00000373589 DGCR2P98153 550 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 HGFACQ04756 655 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 SFRP5Q5T4F7 317 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 ANKRD16Q6P6B7 361 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 PGAP1Q75T13 922 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 ZNF100Q8IYN0 542 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 OR52H1Q8NGJ2 320 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 SMIM4Q8WVI0 70 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 PPP1R14BQ96C90 147 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 ZC3HAV1LQ96H79 300 aaKnown RBP13.72□□□□□ -0.21
HDAC8-209ENST00000373589 RBFOX1Q9NWB1 397 aaKnown RBP13.72□□□□□ -0.21
HDAC8-209ENST00000373589 UPB1Q9UBR1 384 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 V9GYS6 101 aa13.72□□□□□ -0.21
HDAC8-209ENST00000373589 TMEM272A0A1B0GTI8 110 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 LDLRAD4O15165 306 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 LYRM1O43325 122 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 FAM157BP0CG42 384 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 TMIGD3P0DMS9 266 aaPredicted RBP13.71□□□□□ -0.21
HDAC8-209ENST00000373589 MAP2K3P46734 347 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 HTR5AP47898 357 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 INPP1P49441 399 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 EFNB2P52799 333 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 GFOD2Q3B7J2 385 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 SNAI3Q3KNW1 292 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 SLC36A2Q495M3 483 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 Q6ZS92 163 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 BIVMQ86UB2 503 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 OR5AS1Q8N127 324 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 JAGN1Q8N5M9 183 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 CELF2-AS1Q8N7Q2 184 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 CCDC54Q8NEL0 328 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 OR52N4Q8NGI2 321 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 OR13C9Q8NGT0 318 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 GMPPAQ96IJ6 420 aaPredicted RBP13.71□□□□□ -0.21
HDAC8-209ENST00000373589 SORCS2Q96PQ0 1159 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 OR10A2Q9H208 303 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 METTL17Q9H7H0 456 aaPredicted RBP13.71□□□□□ -0.21
HDAC8-209ENST00000373589 ATPIF1Q9UII2 106 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 FREM1Q5H8C1 2179 aa13.71□□□□□ -0.21
HDAC8-209ENST00000373589 XRCC3O43542 346 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 SS18L1O75177 396 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-209ENST00000373589 CTAG2O75638 210 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 DHRS3O75911 302 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 PDGFAP04085 211 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 ARSBP15848 533 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 KIR2DL3P43628 341 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 FAPQ12884 760 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 TMEM69Q5SWH9 247 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 ZNF57Q68EA5 555 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-209ENST00000373589 MZT2BQ6NZ67 158 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 OR4D6Q8NGJ1 314 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 SNRNP27Q8WVK2 155 aaKnown RBP13.7□□□□□ -0.22
HDAC8-209ENST00000373589 SGK3Q96BR1 496 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 NEURL2Q9BR09 285 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 UQCC2Q9BRT2 126 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 KCNK15Q9H427 330 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 CNTD2Q9H8S5 307 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 GLRX2Q9NS18 164 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 RTTNQ86VV8 2226 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 SPTBN2O15020 2390 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 ERCC1P07992 297 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-209ENST00000373589 CD3GP09693 182 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 TAS2R20P59543 309 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 PABPC1L2AQ5JQF8 200 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 C9orf135Q5VTT2 229 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 CDH26Q8IXH8 852 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 UBE2J2Q8N2K1 259 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 CPEB3Q8NE35 698 aaKnown RBP13.7□□□□□ -0.22
HDAC8-209ENST00000373589 DUSP18Q8NEJ0 188 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 C15orf40Q8WUR7 153 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 SARAFQ96BY9 339 aa13.7□□□□□ -0.22
HDAC8-209ENST00000373589 C10orf35Q96D05 121 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms