RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 MEGF11A6BM72 1044 aa13.2□□□□□ -0.3
COL9A2-202ENST00000372748 RNASEK-C17orf49H0YIS7 233 aa13.2□□□□□ -0.3
COL9A2-202ENST00000372748 BGLAPP02818 100 aa13.2□□□□□ -0.3
COL9A2-202ENST00000372748 FABP1P07148 127 aa13.2□□□□□ -0.3
COL9A2-202ENST00000372748 FMODQ06828 376 aa13.2□□□□□ -0.3
COL9A2-202ENST00000372748 COX15Q7KZN9 410 aa13.2□□□□□ -0.3
COL9A2-202ENST00000372748 DCXRQ7Z4W1 244 aa13.2□□□□□ -0.3
COL9A2-202ENST00000372748 SOHLH2Q9NX45 425 aa13.2□□□□□ -0.3
COL9A2-202ENST00000372748 SLC5A6Q9Y289 635 aa13.2□□□□□ -0.3
COL9A2-202ENST00000372748 A0A0A6YYH2 397 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 A6NJ64 397 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 SSX5O60225 188 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 MED6O75586 246 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 CLPSP04118 112 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 VSIG8P0DPA2 414 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 HLA-DOBP13765 273 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 CD1CP29017 333 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 NAAAQ02083 359 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 C1orf100Q5SVJ3 147 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 PHF19Q5T6S3 580 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 IL34Q6ZMJ4 242 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 OR4K15Q8NH41 348 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 OR11A1Q9GZK7 315 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 OR8D2Q9GZM6 311 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 PARP12Q9H0J9 701 aaKnown RBP13.19□□□□□ -0.3
COL9A2-202ENST00000372748 G6PC2Q9NQR9 355 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 GSKIPQ9P0R6 139 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 RAB22AQ9UL26 194 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 PCDH15Q96QU1 1955 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 TRBV6-7A0A0A0MS04 114 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 MBTPS2O43462 519 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 HEXAP06865 529 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 CAV2P51636 162 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 GFERP55789 205 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 RAB5BP61020 215 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 POLR2GP62487 172 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL9A2-202ENST00000372748 EBPQ15125 230 aaKnown RBP13.19□□□□□ -0.3
COL9A2-202ENST00000372748 Q6ZS52 159 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 CCNL2Q96S94 520 aaPredicted RBP13.19□□□□□ -0.3
COL9A2-202ENST00000372748 LRRC61Q9BV99 259 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 NMES1Q9C002 83 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 NIT2Q9NQR4 276 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 RHBDD3Q9Y3P4 386 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 R4GMQ9 66 aa13.19□□□□□ -0.3
COL9A2-202ENST00000372748 FBXO24O75426 580 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 S100A10P60903 97 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 SMCO1Q147U7 214 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 RPL7L1Q6DKI1 246 aaKnown RBP13.18□□□□□ -0.3
COL9A2-202ENST00000372748 FAHD2BQ6P2I3 314 aaPredicted RBP13.18□□□□□ -0.3
COL9A2-202ENST00000372748 MISPQ8IVT2 679 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 LINC00469Q8N7U9 141 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 FAHD2AQ96GK7 314 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 OR10C1Q96KK4 312 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 TGM7Q96PF1 710 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 NAA11Q9BSU3 229 aaPredicted RBP13.18□□□□□ -0.3
COL9A2-202ENST00000372748 C5orf66Q9H5L9 145 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 GSN-AS1Q9NRJ2 163 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 NUDT21O43809 227 aaKnown RBP13.18□□□□□ -0.3
COL9A2-202ENST00000372748 CPT2P23786 658 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 ABCD3P28288 659 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 CX3CR1P49238 355 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 IGLV3-21P80748 117 aaPredicted RBP13.18□□□□□ -0.3
COL9A2-202ENST00000372748 GLO1Q04760 184 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 RAB32Q13637 225 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 PNLIPRP3Q17RR3 467 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 DMRTC1Q5HYR2 192 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 CLEC18BQ6UXF7 455 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 MAMDC2Q7Z304 686 aaPredicted RBP13.18□□□□□ -0.3
COL9A2-202ENST00000372748 LYPD6Q86Y78 171 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 ZNF519Q8TB69 540 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 AKR1E2Q96JD6 320 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 ADAM19Q9H013 955 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 A0A1W2PPE3 182 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 LOC390937A0A1W2PQ73 354 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 NSA2O95478 260 aaKnown RBP13.18□□□□□ -0.3
COL9A2-202ENST00000372748 S100A6P06703 90 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 OR1D4P47884 311 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 TMEM128Q5BJH2 165 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 NAA40Q86UY6 237 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 HOGA1Q86XE5 327 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 OR13C9Q8NGT0 318 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.18□□□□□ -0.3
COL9A2-202ENST00000372748 TMEM230Q96A57 120 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 FOXQ1Q9C009 403 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 METTL8Q9H825 291 aaKnown RBP13.18□□□□□ -0.3
COL9A2-202ENST00000372748 ATXN7L1Q9ULK2 861 aaPredicted RBP13.18□□□□□ -0.3
COL9A2-202ENST00000372748 RP1P56715 2156 aa13.18□□□□□ -0.3
COL9A2-202ENST00000372748 THADAQ6YHU6 1953 aa13.17□□□□□ -0.3
COL9A2-202ENST00000372748 TRAV36DV7A0A075B6V5 113 aa13.17□□□□□ -0.3
COL9A2-202ENST00000372748 SRSF10O75494 262 aaKnown RBP13.17□□□□□ -0.3
COL9A2-202ENST00000372748 ZNF44P15621 663 aa13.17□□□□□ -0.3
COL9A2-202ENST00000372748 FAM76BQ5HYJ3 339 aa13.17□□□□□ -0.3
COL9A2-202ENST00000372748 KIAA0895LQ68EN5 471 aa13.17□□□□□ -0.3
COL9A2-202ENST00000372748 DHRS11Q6UWP2 260 aa13.17□□□□□ -0.3
COL9A2-202ENST00000372748 SKA3Q8IX90 412 aa13.17□□□□□ -0.3
COL9A2-202ENST00000372748 ZNF101Q8IZC7 436 aa13.17□□□□□ -0.3
COL9A2-202ENST00000372748 ADAMTS17Q8TE56 1095 aa13.17□□□□□ -0.3
COL9A2-202ENST00000372748 TSLPQ969D9 159 aa13.17□□□□□ -0.3
COL9A2-202ENST00000372748 ISOC2Q96AB3 205 aa13.17□□□□□ -0.3
COL9A2-202ENST00000372748 ADAT3Q96EY9 351 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms