RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 A0A0J9YY10 115 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 DUSP3P51452 185 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-201ENST00000371817 OR52L2PQ8NGH6 319 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 ATP5SQ99766 215 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 ZNF426Q9BUY5 554 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 LPAR5Q9H1C0 372 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 TIMM9Q9Y5J7 89 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 BCL9O00512 1426 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 SLC5A10A0PJK1 596 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 FURINP09958 794 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 ZNF343Q6P1L6 599 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 EGLN2Q96KS0 407 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 UQCC1Q9NVA1 299 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 CTSFQ9UBX1 484 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 SPINK4O60575 86 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 EDDM3BP56851 147 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 COX20Q5RI15 118 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 HSD17B13Q7Z5P4 300 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-201ENST00000371817 SPHK2Q9NRA0 654 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 MED1Q15648 1581 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-201ENST00000371817 SDCBPO00560 298 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-201ENST00000371817 ZNF737O75373 536 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 GNB1P62873 340 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 GRASPQ7Z6J2 395 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-201ENST00000371817 DEFB119Q8N690 84 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 ENTPD2Q9Y5L3 495 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 MISPQ8IVT2 679 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 BVESQ8NE79 360 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 NUDCD2Q8WVJ2 157 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 PIGTQ969N2 578 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 NUDT16L1Q9BRJ7 211 aaKnown RBP13.93□□□□□ -0.18
COL5A1-201ENST00000371817 TINAGL1Q9GZM7 467 aaPredicted RBP13.93□□□□□ -0.18
COL5A1-201ENST00000371817 OR6C3Q9NZP0 311 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 UBR2Q8IWV8 1755 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 RRP8O43159 456 aaKnown RBP13.93□□□□□ -0.18
COL5A1-201ENST00000371817 CDC34P49427 236 aaPredicted RBP13.93□□□□□ -0.18
COL5A1-201ENST00000371817 EGR3Q06889 387 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 DEFB110Q30KQ9 67 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 AWAT1Q58HT5 328 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 OR4A4PQ8NGN8 299 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 HEATR5AQ86XA9 2040 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 XRCC2O43543 280 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 PMP22Q01453 160 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 NR0B2Q15466 257 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 LSRQ86X29 649 aaPredicted RBP13.93□□□□□ -0.18
COL5A1-201ENST00000371817 AUNIPQ9H7T9 357 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 TRAV36DV7A0A075B6V5 113 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 A0A1W2PQU0 124 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 GALR2O43603 387 aaPredicted RBP13.93□□□□□ -0.18
COL5A1-201ENST00000371817 RAG2P55895 527 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 CLDN17P56750 224 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 ERVS71-1P61550 626 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 MAVSQ7Z434 540 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 MAGT1Q9H0U3 335 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 RABIFP47224 123 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 HES1Q14469 280 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 DOK3Q7L591 496 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 FAM71CQ8NEG0 241 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 TRAPPC4Q9Y296 219 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 LSM2Q9Y333 95 aaKnown RBP13.93□□□□□ -0.18
COL5A1-201ENST00000371817 S100A4P26447 101 aaKnown RBP13.93□□□□□ -0.18
COL5A1-201ENST00000371817 CCDC190Q86UF4 302 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 STPG2Q8N412 459 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 KLRG1Q96E93 195 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 NEURL4Q96JN8 1562 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 ARG1P05089 322 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 TCN2P20062 427 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 CHRNA7P36544 502 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 ADAT3Q96EY9 351 aaPredicted RBP13.93□□□□□ -0.18
COL5A1-201ENST00000371817 NPAS1Q99742 590 aa13.93□□□□□ -0.18
COL5A1-201ENST00000371817 PI3P19957 117 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 ERVFRD-1P60508 538 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 COL19A1Q14993 1142 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 ZNF511Q8NB15 262 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 DCBLD2Q96PD2 775 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 RCL1Q9Y2P8 373 aaKnown RBP13.92□□□□□ -0.18
COL5A1-201ENST00000371817 TMEM238LA0A1B0GVL6 79 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 MAP1LC3B2A6NCE7 125 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 A6NJY4 79 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 HERVK_113P61574 105 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 ARG2P78540 354 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 SPICQ8N5J4 248 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 MAP1LC3BQ9GZQ8 125 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 AAMDCQ9H7C9 122 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 CA12O43570 354 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 STAG3L3P0CL85 134 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 OR8G1Q15617 311 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 SLC35E4Q6ICL7 350 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 CBARPQ8N350 705 aaPredicted RBP13.92□□□□□ -0.18
COL5A1-201ENST00000371817 TEAD3Q99594 435 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 SIRT7Q9NRC8 400 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 INTS1Q8N201 2190 aaKnown RBP13.92□□□□□ -0.18
COL5A1-201ENST00000371817 GPR75O95800 540 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 F2P00734 622 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 PITX1P78337 314 aaPredicted RBP13.92□□□□□ -0.18
COL5A1-201ENST00000371817 LINC00303Q3SY05 128 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 ZNF385BQ569K4 471 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 HES4Q9HCC6 221 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 LRRC30A6NM36 301 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 DSC1Q08554 894 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms