RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ACHEP22303 614 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 GIFP27352 417 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 BLVRAP53004 296 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 ZNF92Q03936 586 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 LCN1P1Q5VSP4 162 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 FBXW12Q6X9E4 464 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 COLCA1Q6ZS62 124 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 IL17RELQ6ZVW7 336 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 FAM57BQ71RH2 274 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 OR5L1Q8NGL2 311 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 OTOSQ8NHW6 89 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 CCL17Q92583 94 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 HAVCR1Q96D42 359 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 KCNJ15Q99712 375 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 GABARAPL3Q9BY60 117 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 LPAR2Q9HBW0 351 aa12.42□□□□□ -0.42
SF3B5-201ENST00000367569 F5H5P2 479 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 MAGEB4O15481 346 aaPredicted RBP12.41□□□□□ -0.42
SF3B5-201ENST00000367569 BAG2O95816 211 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 ALPLP05186 524 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 LYNP07948 512 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 H2BFMP0C1H6 154 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 OTX1P32242 354 aaPredicted RBP12.41□□□□□ -0.42
SF3B5-201ENST00000367569 OPRL1P41146 370 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 ZNF121P58317 390 aaPredicted RBP12.41□□□□□ -0.42
SF3B5-201ENST00000367569 HOXA4Q00056 320 aaPredicted RBP12.41□□□□□ -0.42
SF3B5-201ENST00000367569 MALLQ13021 153 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 MOGQ16653 247 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 KRTAP24-1Q3LI83 254 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 ZMAT1Q5H9K5 638 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 TEX30Q5JUR7 227 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 FAM166AQ6J272 317 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 CLDND2Q8NHS1 167 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 FAM81AQ8TBF8 368 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 TMEM163Q8TC26 289 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 RNF133Q8WVZ7 376 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 COG8Q96MW5 612 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 OR2V2Q96R30 315 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 TBX5Q99593 518 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 RBM4BQ9BQ04 359 aaKnown RBP12.41□□□□□ -0.42
SF3B5-201ENST00000367569 PRRG3Q9BZD7 231 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 CYSLTR2Q9NS75 346 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 AASSQ9UDR5 926 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 LAMP5Q9UJQ1 280 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 KCNS2Q9ULS6 477 aa12.41□□□□□ -0.42
SF3B5-201ENST00000367569 ISPDA4D126 451 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 IQCF6A8MYZ5 107 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 J3QW42 95 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 CHN2P52757 468 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 GRB2P62993 217 aaKnown RBP12.4□□□□□ -0.42
SF3B5-201ENST00000367569 SRSF2Q01130 221 aaKnown RBP12.4□□□□□ -0.42
SF3B5-201ENST00000367569 CDK5R2Q13319 367 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 FAM209AQ5JX71 171 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 SLC35D3Q5M8T2 416 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 FAM120AOSQ5T036 256 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 DRAM2Q6UX65 266 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 PLEKHG7Q6ZR37 379 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 PGAP1Q75T13 922 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 SLC16A9Q7RTY1 509 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 C1orf174Q8IYL3 243 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 PQLC1Q8N2U9 271 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 OR8G5Q8NG78 346 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 OR56B2PQ8NGI1 322 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 ZNF420Q8TAQ5 688 aaPredicted RBP12.4□□□□□ -0.42
SF3B5-201ENST00000367569 STMN2Q93045 179 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 UBE2FQ969M7 185 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 ZNF582Q96NG8 517 aaPredicted RBP12.4□□□□□ -0.42
SF3B5-201ENST00000367569 MBOAT4Q96T53 435 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 CNN2Q99439 309 aaKnown RBP12.4□□□□□ -0.42
SF3B5-201ENST00000367569 TEAD3Q99594 435 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 EGLN1Q9GZT9 426 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 NKIRAS2Q9NYR9 191 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 ZNF319Q9P2F9 582 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 WIPI2Q9Y4P8 454 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 LRP12Q9Y561 859 aa12.4□□□□□ -0.42
SF3B5-201ENST00000367569 NBEAL1Q6ZS30 2694 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 ERICH4A6NGS2 130 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 GGT3PA6NGU5 568 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 CLDN25C9JDP6 229 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 ZNF205O95201 554 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 TGFAP01135 160 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 TACSTD2P09758 323 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 SRD5A1P18405 259 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 CA6P23280 308 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 CRYBB2P43320 205 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 TIGD6Q17RP2 521 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 HFEQ30201 348 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 AADACL4Q5VUY2 407 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 PRAMEF6Q5VXH4 476 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 MEPCEQ7L2J0 689 aaKnown RBP12.39□□□□□ -0.43
SF3B5-201ENST00000367569 KRT77Q7Z794 578 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 SLC35F2Q8IXU6 374 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 OR51G2Q8NGK0 314 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 SPRYD4Q8WW59 207 aaPredicted RBP12.39□□□□□ -0.43
SF3B5-201ENST00000367569 PGAM5Q96HS1 289 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 SLC29A1Q99808 456 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 ADAT1Q9BUB4 502 aaKnown RBP12.39□□□□□ -0.43
SF3B5-201ENST00000367569 TOR3AQ9H497 397 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 PPP1R3EQ9H7J1 279 aa12.39□□□□□ -0.43
SF3B5-201ENST00000367569 ADGRL4Q9HBW9 690 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms