RNA–Protein interactions for RNA: ENST00000365233.1

RNU4-12P-201, Transcript of RNA, U4 small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4-12P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-12P-201ENST00000365233 TDRD3Q9H7E2 651 aaKnown RBP0.67□□□□□ -2.3
RNU4-12P-201ENST00000365233 VPS37BQ9H9H4 285 aa0.67□□□□□ -2.3
RNU4-12P-201ENST00000365233 ZNF302Q9NR11 478 aa0.67□□□□□ -2.3
RNU4-12P-201ENST00000365233 NMRK1Q9NWW6 199 aa0.67□□□□□ -2.3
RNU4-12P-201ENST00000365233 PTBP2Q9UKA9 531 aaKnown RBP0.67□□□□□ -2.3
RNU4-12P-201ENST00000365233 HPCAL4Q9UM19 191 aa0.67□□□□□ -2.3
RNU4-12P-201ENST00000365233 RRP15Q9Y3B9 282 aaKnown RBP0.67□□□□□ -2.3
RNU4-12P-201ENST00000365233 DENND4AQ7Z401 1863 aa0.67□□□□□ -2.3
RNU4-12P-201ENST00000365233 A0A0J9YYE9 177 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 OR52A4PA6NMU1 304 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 LRRIQ3A6PVS8 624 aaPredicted RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 NDUFS8O00217 210 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 MPHOSPH10O00566 681 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 TAAR5O14804 337 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 NVLO15381 856 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 NUPL2O15504 423 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 SPOPO43791 374 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 ZNF73O43830 326 aaPredicted RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 TIMM8AO60220 97 aaPredicted RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 CACNG3O60359 315 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 CDC40O60508 579 aaKnown RBP eCLIP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 CIB2O75838 187 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 CLPXO76031 633 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 TRBC1P01850 177 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 PABPC4LP0CB38 370 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 ATF6P18850 670 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 CSRP1P21291 193 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 RBM34P42696 430 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 MAGEA1P43355 309 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 CSNK1EP49674 416 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 ACTR3P61158 418 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 KCNJ2P63252 427 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 ELF3P78545 371 aaPredicted RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 KDSRQ06136 332 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 TGM3Q08188 693 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 IL24Q13007 206 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 DDX39BQ13838 428 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 ZMYND11Q15326 602 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 ZNF141Q15928 474 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 IMMTQ16891 758 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 SLC25A35Q3KQZ1 300 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 C6orf226Q5I0X4 101 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 SPANXN2Q5MJ10 180 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 CTSL3PQ5NE16 218 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 UBE2UQ5VVX9 321 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 CARD17Q5XLA6 110 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 ANGPTL8Q6UXH0 198 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 FAM43BQ6ZT52 329 aaPredicted RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 OTUD6AQ7L8S5 288 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 SSX9Q7RTT3 188 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 SCD5Q86SK9 330 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 CNPY4Q8N129 248 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 BBS5Q8N3I7 341 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 MS4A15Q8N5U1 240 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 ZFP41Q8N8Y5 198 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 EIF1ADQ8N9N8 165 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 FAM184AQ8NB25 1140 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 SPATA4Q8NEY3 305 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 OR7G2Q8NG99 324 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 OR2T3Q8NH03 318 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 MUC7Q8TAX7 377 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 LRRC29Q8WV35 223 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 NT5C3BQ969T7 300 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 C12orf42Q96LP6 360 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 IGF2BP2-AS1Q96M15 143 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 TMEM43Q9BTV4 400 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 IQCGQ9H095 443 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 VCX2Q9H322 139 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 FANCEQ9HB96 536 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 RAB20Q9NX57 234 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 SLC2A8Q9NY64 477 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 PEF1Q9UBV8 284 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 IKZF2Q9UKS7 526 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 USP47Q96K76 1375 aa0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 AQRO60306 1485 aaKnown RBP eCLIP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 EIF4G1Q04637 1599 aaKnown RBP0.66□□□□□ -2.3
RNU4-12P-201ENST00000365233 USP42Q9H9J4 1324 aaKnown RBP0.65□□□□□ -2.3
RNU4-12P-201ENST00000365233 RP1L1Q8IWN7 2480 aaPredicted RBP0.65□□□□□ -2.3
RNU4-12P-201ENST00000365233 A0A075B6Q4 140 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 A0A0J9YXV3 536 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 GSTTP1A0A1W2PQM5 241 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 CTAGE15A4D2H0 777 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 LRRIQ4A6NIV6 560 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 C9JVG2 144 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 NDUFAB1O14561 156 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 PPP1R2P9O14990 202 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 NEMFO60524 1076 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 SNNO75324 88 aaPredicted RBP0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 GATBO75879 557 aaKnown RBP0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 LCA5LO95447 670 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 SNAI1O95863 264 aaPredicted RBP0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 IFNB1P01574 187 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 RPN2P04844 631 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 GFAPP14136 432 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 ATP1B2P14415 290 aaPredicted RBP0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 PRKACAP17612 351 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 MSR1P21757 451 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 GALP22466 123 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 RRM2P31350 389 aa0.65□□□□□ -2.31
RNU4-12P-201ENST00000365233 ERFP50548 548 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms