RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 C11orf87Q6NUJ2 197 aa16.56■□□□□ 0.24
SNX11-201ENST00000359238 OR1J4Q8NGS1 313 aa16.56■□□□□ 0.24
SNX11-201ENST00000359238 GPX7Q96SL4 187 aaPredicted RBP16.56■□□□□ 0.24
SNX11-201ENST00000359238 TLNRD1Q9H1K6 362 aa16.56■□□□□ 0.24
SNX11-201ENST00000359238 ZNF230Q9UIE0 474 aaPredicted RBP16.56■□□□□ 0.24
SNX11-201ENST00000359238 A0A1B0GTI1 187 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 ARPC3O15145 178 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 S100A6P06703 90 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 FTH1P19P0C7X4 201 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 TMIGD3P0DMS9 266 aaPredicted RBP16.55■□□□□ 0.24
SNX11-201ENST00000359238 HLA-DOBP13765 273 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 NPBWR1P48145 328 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 Q0VFX4 171 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 FOXF1Q12946 379 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 EIF3IQ13347 325 aaKnown RBP16.55■□□□□ 0.24
SNX11-201ENST00000359238 RAB12Q6IQ22 244 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 LIN54Q6MZP7 749 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 ACOT7LQ6ZUV0 252 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 PPP1R32Q7Z5V6 425 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 MRPL48Q96GC5 212 aaKnown RBP16.55■□□□□ 0.24
SNX11-201ENST00000359238 NMNAT2Q9BZQ4 307 aa16.55■□□□□ 0.24
SNX11-201ENST00000359238 CNOT1A5YKK6 2376 aaKnown RBP16.55■□□□□ 0.24
SNX11-201ENST00000359238 RNF222A6NCQ9 220 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 G3V3Y1 287 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 ITGB2P05107 769 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 CD14P08571 375 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 FBXO45P0C2W1 286 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 RPS27P42677 84 aaKnown RBP16.54■□□□□ 0.24
SNX11-201ENST00000359238 POLR2HP52434 150 aaKnown RBP16.54■□□□□ 0.24
SNX11-201ENST00000359238 RAB5BP61020 215 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 SNRPEP62304 92 aaKnown RBP16.54■□□□□ 0.24
SNX11-201ENST00000359238 LINC01590Q5TEZ4 76 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 C5orf46Q6UWT4 87 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 ZNF511Q8NB15 262 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 STEAP2Q8NFT2 490 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 FOXN4Q96NZ1 517 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 SEC11CQ9BY50 192 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 BCL2L14Q9BZR8 327 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 OR51M1Q9H341 326 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 POFUT1Q9H488 388 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 FARSAQ9Y285 508 aaKnown RBP16.54■□□□□ 0.24
SNX11-201ENST00000359238 CHCHD2Q9Y6H1 151 aaPredicted RBP16.54■□□□□ 0.24
SNX11-201ENST00000359238 DCHS1Q96JQ0 3298 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 A0A087WV48 116 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 PSMD9O00233 223 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 OR4E1P0C645 316 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 GTF2F2P13984 249 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 PRPS1P60891 318 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 C17orf67Q0P5P2 114 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 SLC6A19Q695T7 634 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 LPCAT3Q6P1A2 487 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 STAC2Q6ZMT1 411 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 NDUFAF7Q7L592 441 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 GRINAQ7Z429 371 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 OR5M8Q8NGP6 311 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 OR6K6Q8NGW6 343 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 SLC39A7Q92504 469 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 WNT2BQ93097 391 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 SPACA9Q96E40 222 aaPredicted RBP16.54■□□□□ 0.24
SNX11-201ENST00000359238 CNTNAP3BQ96NU0 1288 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 SLITRK2Q9H156 845 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 RNF122Q9H9V4 155 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 UPB1Q9UBR1 384 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 NCKAP5O14513 1909 aa16.54■□□□□ 0.24
SNX11-201ENST00000359238 ABOP16442 354 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 S100PP25815 95 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 NBL1P41271 181 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 SCAND1P57086 179 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 EXT1Q16394 746 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 C1orf140Q5VVS0 124 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 EXD3Q8N9H8 876 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 WDSUB1Q8N9V3 476 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 POC1BQ8TC44 478 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 RGP1Q92546 391 aaPredicted RBP16.53■□□□□ 0.24
SNX11-201ENST00000359238 CCNL2Q96S94 520 aaPredicted RBP16.53■□□□□ 0.24
SNX11-201ENST00000359238 TCF7L1Q9HCS4 588 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 NIT2Q9NQR4 276 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 MRPS18BQ9Y676 258 aaKnown RBP16.53■□□□□ 0.24
SNX11-201ENST00000359238 TRAV36DV7A0A075B6V5 113 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 ANKUB1A6NFN9 424 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 H3BML4 177 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 ACTL6AO96019 429 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 DLSTP36957 453 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 MAGEB1P43366 347 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 HABP2Q14520 560 aaPredicted RBP16.53■□□□□ 0.24
SNX11-201ENST00000359238 ARL11Q969Q4 196 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 METTL7AQ9H8H3 244 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 FKRPQ9H9S5 495 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 SRA1Q9HD15 236 aaKnown RBP16.53■□□□□ 0.24
SNX11-201ENST00000359238 MYOZ1Q9NP98 299 aaPredicted RBP16.53■□□□□ 0.24
SNX11-201ENST00000359238 COMMD9Q9P000 198 aa16.53■□□□□ 0.24
SNX11-201ENST00000359238 C5orf52A6NGY3 159 aa16.52■□□□□ 0.24
SNX11-201ENST00000359238 UBE2CO00762 179 aa16.52■□□□□ 0.24
SNX11-201ENST00000359238 CD79AP11912 226 aa16.52■□□□□ 0.24
SNX11-201ENST00000359238 ZNF417Q8TAU3 575 aa16.52■□□□□ 0.24
SNX11-201ENST00000359238 ZNF587Q96SQ5 575 aaPredicted RBP16.52■□□□□ 0.24
SNX11-201ENST00000359238 SEBOXQ9HB31 216 aaPredicted RBP16.52■□□□□ 0.24
SNX11-201ENST00000359238 WIF1Q9Y5W5 379 aa16.52■□□□□ 0.24
SNX11-201ENST00000359238 FTCDNL1E5RQL4 147 aa16.52■□□□□ 0.23
SNX11-201ENST00000359238 ADRA2CP18825 462 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms