RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 RFC3P40938 356 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 HTR5AP47898 357 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 DCAF12Q5T6F0 453 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 LIX1LQ8IVB5 337 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 GALNT16Q8N428 558 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 IL22RA1Q8N6P7 574 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 DCUN1D4Q92564 292 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 BORCS8Q96FH0 119 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 GFI1Q99684 422 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 SLC6A15Q9H2J7 730 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 RBM7Q9Y580 266 aaKnown RBP9.96□□□□□ -0.81
SSU72-202ENST00000359060 ERVH48-1M5A8F1 160 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 TNFSF11O14788 317 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 IL5P05113 134 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 HOXB5P09067 269 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 CARD18P57730 90 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 FXYD4P59646 89 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 RPS18P62269 152 aaKnown RBP9.96□□□□□ -0.81
SSU72-202ENST00000359060 CLVS2Q5SYC1 327 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 PDSS1Q5T2R2 415 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 ABHD17BQ5VST6 288 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 BATF2Q8N1L9 274 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 OR56B1Q8NGI3 324 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 BCL2L14Q9BZR8 327 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 PIGLQ9Y2B2 252 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 HDGFL3Q9Y3E1 203 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 RIF1Q5UIP0 2472 aaKnown RBP9.96□□□□□ -0.81
SSU72-202ENST00000359060 TRBV5-7A0A0A0MS05 114 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 PPP3CBP16298 524 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 FAHP16930 419 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 ZNF626Q68DY1 528 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 CCDC36Q8IYA8 594 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 HIST1H2AAQ96QV6 131 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 ELF5Q9UKW6 265 aaPredicted RBP9.96□□□□□ -0.82
SSU72-202ENST00000359060 SLC7A11Q9UPY5 501 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 TOX3O15405 576 aaPredicted RBP9.96□□□□□ -0.82
SSU72-202ENST00000359060 ZNF354AO60765 605 aaPredicted RBP9.96□□□□□ -0.82
SSU72-202ENST00000359060 IFNA21P01568 189 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 CLDN6P56747 220 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 STARD6P59095 220 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 DEGS2Q6QHC5 323 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 ZNF574Q6ZN55 896 aaPredicted RBP9.96□□□□□ -0.82
SSU72-202ENST00000359060 MAML2Q8IZL2 1156 aaPredicted RBP9.96□□□□□ -0.82
SSU72-202ENST00000359060 ADAT3Q96EY9 351 aaPredicted RBP9.96□□□□□ -0.82
SSU72-202ENST00000359060 RADILQ96JH8 1075 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 PIGQQ9BRB3 760 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 CHRNA10Q9GZZ6 450 aa9.96□□□□□ -0.82
SSU72-202ENST00000359060 IGKV1D-43A0A0B4J1Z2 117 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 CXCL13O43927 109 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 WISP1O95388 367 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 IGF2P01344 180 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 AIMP2Q13155 320 aaKnown RBP9.95□□□□□ -0.82
SSU72-202ENST00000359060 PGAP1Q75T13 922 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 DOK3Q7L591 496 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 ARHGEF39Q8N4T4 335 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 MARCH1Q8TCQ1 289 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 SEH1LQ96EE3 360 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 ZNF416Q9BWM5 594 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 ZNF442Q9H7R0 627 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 GPR27Q9NS67 375 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 MEMO1Q9Y316 297 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 M0R135 149 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 RLN2P04090 185 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 GRB2P62993 217 aaKnown RBP9.95□□□□□ -0.82
SSU72-202ENST00000359060 BAMBIQ13145 260 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 LCN10Q6JVE6 187 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 SLC16A14Q7RTX9 510 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 PIGCQ92535 297 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 ZNF799Q96GE5 643 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 ZFP64Q9NPA5 681 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 GPR173Q9NS66 373 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 A0A1W2PPC1 479 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 DHHO43323 396 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 FAM157BP0CG42 384 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 ENPP1P22413 925 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 AVPR2P30518 371 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 ROM1Q03395 351 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 PLPPR5Q32ZL2 321 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 SFRP5Q5T4F7 317 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 RELL2Q8NC24 303 aaPredicted RBP9.95□□□□□ -0.82
SSU72-202ENST00000359060 RNF133Q8WVZ7 376 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 ROBO4Q8WZ75 1007 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 ALKBH3Q96Q83 286 aaPredicted RBP9.95□□□□□ -0.82
SSU72-202ENST00000359060 CDX2Q99626 313 aaPredicted RBP9.95□□□□□ -0.82
SSU72-202ENST00000359060 LDAHQ9H6V9 325 aa9.95□□□□□ -0.82
SSU72-202ENST00000359060 TTC28Q96AY4 2481 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 LOC101059948A0A1B0GTJ6 334 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 SNAPC5O75971 98 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 CHRM2P08172 466 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 VSIG10L2P0DP72 767 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 CCL3P10147 92 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 C19orf57Q0VDD7 668 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 MOGAT2Q3SYC2 334 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 SPIN3Q5JUX0 258 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 LINC00696Q6ZRV3 163 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 TMEM229BQ8NBD8 167 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 OR10R2Q8NGX6 335 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 LIN37Q96GY3 246 aaPredicted RBP9.94□□□□□ -0.82
SSU72-202ENST00000359060 UCN2Q96RP3 112 aa9.94□□□□□ -0.82
SSU72-202ENST00000359060 OR51B6Q9H340 312 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms