RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 MAGT1Q9H0U3 335 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 LHX3Q9UBR4 397 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 EMC9Q9Y3B6 208 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 HEPACAM2A8MVW5 462 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 CD70P32970 193 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 CLEC12BQ2HXU8 276 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 RNASEKQ6P5S7 137 aaKnown RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 NANOS1Q8WY41 292 aaKnown RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 RAB18Q9NP72 206 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 ING1Q9UK53 422 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 PTPRDP23468 1912 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 CXCL14O95715 111 aa5.52□□□□□ -1.52
VPS13B-203ENST00000358544 FCGR2AP12318 317 aa5.52□□□□□ -1.52
VPS13B-203ENST00000358544 USF1P22415 310 aaPredicted RBP5.52□□□□□ -1.52
VPS13B-203ENST00000358544 PSMB5P28074 263 aa5.52□□□□□ -1.52
VPS13B-203ENST00000358544 RAB38P57729 211 aa5.52□□□□□ -1.52
VPS13B-203ENST00000358544 MOB3CQ70IA8 216 aa5.52□□□□□ -1.52
VPS13B-203ENST00000358544 FKRPQ9H9S5 495 aa5.52□□□□□ -1.52
VPS13B-203ENST00000358544 PTPRFP10586 1907 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 FAM166BA8MTA8 275 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 VEGFDO43915 354 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 DUSP11O75319 330 aaKnown RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 CFDP00746 253 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 CLDN2P57739 230 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 CNN3Q15417 329 aaKnown RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 TMEM128Q5BJH2 165 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 ACER2Q5QJU3 275 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 LY6G5CQ5SRR4 150 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 C19orf35Q6ZS72 473 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 OR51A2Q8NGJ7 313 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 RAB33BQ9H082 229 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF93P35789 620 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 CSNK1A1P48729 337 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.52□□□□□ -1.534e-6■■■■■ 36.9
VPS13B-203ENST00000358544 NXPE3Q969Y0 559 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 NAGKQ9UJ70 344 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 ASCL1P50553 236 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 FIGLAQ6QHK4 219 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 C17orf47Q8NEP4 570 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 FOXJ1Q92949 421 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 FGGYQ96C11 551 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 PLEKHF2Q9H8W4 249 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 EML5Q05BV3 1969 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 PRKRAO75569 313 aaKnown RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 F13BP05160 661 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 AMTP48728 403 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 POLR2HP52434 150 aaKnown RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 SPCS3P61009 180 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF124Q15973 351 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 STUMQ69YW2 141 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 GGACTQ9BVM4 153 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 OPN3Q9H1Y3 402 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 SLC35D1Q9NTN3 355 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 A4GNTQ9UNA3 340 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 PEX12O00623 359 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 DOK2O60496 412 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 NXPH3O95157 252 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 CHRM2P08172 466 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF133P52736 654 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 SLC25A30Q5SVS4 291 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF660Q6AZW8 331 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 WDR5BQ86VZ2 330 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 SLC26A10Q8NG04 563 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 C11orf84Q9BUA3 381 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 PARD6GQ9BYG4 376 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 ZFP64Q9NPA5 681 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 INSL5Q9Y5Q6 135 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 BLACEA4D250 179 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 CD200P41217 278 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 SMAD4Q13485 552 aaKnown RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 PLCXD3Q63HM9 321 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 TMEM64Q6YI46 380 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 TP53RKQ96S44 253 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 ABHD6Q9BV23 337 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 A0A1W2PRU2 124 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 IGLON5A6NGN9 336 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 SIGLEC5O15389 551 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 FGF2P09038 288 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 NID1P14543 1247 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 POU3F1Q03052 451 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 SIGLEC14Q08ET2 396 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 PLXDC2Q6UX71 529 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 TSTD1Q8NFU3 115 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 CLDND1Q9NY35 253 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 TMEM184BQ9Y519 407 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 GREB1Q4ZG55 1949 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 MANSC4A6NHS7 340 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 DNASE2O00115 360 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 TBX19O60806 448 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 TSFMP43897 325 aaKnown RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 SULT1A1P50225 295 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 GDF6Q6KF10 455 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-203ENST00000358544 CMTM8Q8IZV2 173 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF611Q8N823 705 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 SLC38A9Q8NBW4 561 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 KREMEN2Q8NCW0 462 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 OR9A4Q8NGU2 314 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 CUTCQ9NTM9 273 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 CBLN4Q9NTU7 201 aa5.52□□□□□ -1.53
VPS13B-203ENST00000358544 CARHSP1Q9Y2V2 147 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms