RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 ALDH3B1P43353 468 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 ZNF829Q3KNS6 432 aaPredicted RBP20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 LAIR2Q6ISS4 152 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 FAM57BQ71RH2 274 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 KCTD20Q7Z5Y7 419 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 OR52I1Q8NGK6 324 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 SNX33Q8WV41 574 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 SGK3Q96BR1 496 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 PERPQ96FX8 193 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 VRK1Q99986 396 aaPredicted RBP20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 JAM3Q9BX67 310 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 OR10A2Q9H208 303 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 RGCCQ9H4X1 137 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 BARX1Q9HBU1 254 aaPredicted RBP20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 FGF20Q9NP95 211 aaPredicted RBP20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 PLCXD1Q9NUJ7 323 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 FAM206AQ9NX38 181 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 RAB26Q9ULW5 256 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 MYRFQ9Y2G1 1151 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 N6AMT1Q9Y5N5 214 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 MYO9AB2RTY4 2548 aa20.76■□□□□ 0.91
ALKAL1-201ENST00000358543 C5orf63A6NC05 138 aa20.75■□□□□ 0.91
ALKAL1-201ENST00000358543 MAGEB4O15481 346 aaPredicted RBP20.75■□□□□ 0.91
ALKAL1-201ENST00000358543 ART1P52961 327 aa20.75■□□□□ 0.91
ALKAL1-201ENST00000358543 ZNF92Q03936 586 aa20.75■□□□□ 0.91
ALKAL1-201ENST00000358543 CDONQ4KMG0 1287 aa20.75■□□□□ 0.91
ALKAL1-201ENST00000358543 GLYATL3Q5SZD4 288 aa20.75■□□□□ 0.91
ALKAL1-201ENST00000358543 PRSS57Q6UWY2 283 aa20.75■□□□□ 0.91
ALKAL1-201ENST00000358543 PGAP1Q75T13 922 aa20.75■□□□□ 0.91
ALKAL1-201ENST00000358543 PGAM5Q96HS1 289 aa20.75■□□□□ 0.91
ALKAL1-201ENST00000358543 AKAP9Q99996 3911 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 CREBBPQ92793 2442 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 PLSCR5A0PG75 271 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 C17orf100A8MU93 164 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 IQCF6A8MYZ5 107 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 TBX1O43435 398 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 TIMM8AO60220 97 aaPredicted RBP20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 SRSF10O75494 262 aaKnown RBP20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 F12P00748 615 aaPredicted RBP20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 ERCC1P07992 297 aaPredicted RBP20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 CFL1P23528 166 aaKnown RBP20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 DCKP27707 260 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 EFNA4P52798 201 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 CSNK2BP67870 215 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 ALKBH6Q3KRA9 238 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 MRPL21Q7Z2W9 205 aaKnown RBP20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 YIPF7Q8N8F6 280 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 OR2AE1Q8NHA4 323 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 NEU4Q8WWR8 484 aaPredicted RBP20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 MRPL48Q96GC5 212 aaKnown RBP20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 ZNF649Q9BS31 505 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 BRD7Q9NPI1 651 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 ZNF319Q9P2F9 582 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 ZNF391Q9UJN7 358 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 R4GMQ9 66 aa20.74■□□□□ 0.91
ALKAL1-201ENST00000358543 PRRC2AP48634 2157 aaKnown RBP20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 FAM20BO75063 409 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 NDUFS7O75251 213 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 IGHV4-39P01824 125 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 TACSTD2P09758 323 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 NAT2P11245 290 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 PIPP12273 146 aaPredicted RBP20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 GALEQ14376 348 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 TIGD6Q17RP2 521 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 ZMAT1Q5H9K5 638 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 LIPNQ5VXI9 398 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 SHEQ5VZ18 495 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 OR2T2Q6IF00 324 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 ZCCHC24Q8N2G6 241 aaKnown RBP20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 SORCS2Q96PQ0 1159 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 ZNF184Q99676 751 aaPredicted RBP20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 MOB1AQ9H8S9 216 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 ERVK13-1Q9NX77 482 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 NKIRAS2Q9NYR9 191 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 CNOT2Q9NZN8 540 aaKnown RBP20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 ITGB1BP2Q9UKP3 347 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 SNX5Q9Y5X3 404 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 MAST4O15021 2626 aa20.73■□□□□ 0.91
ALKAL1-201ENST00000358543 PNPP00491 289 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 ADH4P08319 380 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 ZNF81P51508 661 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 ACTA2P62736 377 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 ACTG2P63267 376 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 TESK1Q15569 626 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 SNCBQ16143 134 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 PCGF3Q3KNV8 242 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 C6orf141Q5SZD1 244 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 FAM220AQ7Z4H9 259 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 OR8G5Q8NG78 346 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 OR8B12Q8NGG6 310 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 GGHQ92820 318 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 ITFG2Q969R8 447 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 REEP6Q96HR9 211 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 SIGLEC11Q96RL6 698 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 DIRC2Q96SL1 478 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 PBOV1Q9GZY1 135 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 G6PC2Q9NQR9 355 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 NUFIP1Q9UHK0 495 aaKnown RBP20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 ZDHHC8Q9ULC8 765 aa20.72■□□□□ 0.91
ALKAL1-201ENST00000358543 DIMT1Q9UNQ2 313 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms