RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 CCR9P51686 369 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 IDNKQ5T6J7 187 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 NHLRC1Q6VVB1 395 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 LRRC75AQ8NAA5 344 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 FZR1Q9UM11 496 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 B4DXG7 233 aa8□□□□□ -1.13
UPF2-202ENST00000357604 C1QCP02747 245 aa8□□□□□ -1.13
UPF2-202ENST00000357604 SLC2A5P22732 501 aa8□□□□□ -1.13
UPF2-202ENST00000357604 GLP1RP43220 463 aa8□□□□□ -1.13
UPF2-202ENST00000357604 PRDX4Q13162 271 aa8□□□□□ -1.13
UPF2-202ENST00000357604 GDPGP1Q6ZNW5 385 aa8□□□□□ -1.13
UPF2-202ENST00000357604 TMEM17Q86X19 198 aa8□□□□□ -1.13
UPF2-202ENST00000357604 CLVS1Q8IUQ0 354 aaPredicted RBP8□□□□□ -1.13
UPF2-202ENST00000357604 TNFAIP8L1Q8WVP5 186 aa8□□□□□ -1.13
UPF2-202ENST00000357604 SLC29A1Q99808 456 aa8□□□□□ -1.13
UPF2-202ENST00000357604 CACNG6Q9BXT2 260 aa8□□□□□ -1.13
UPF2-202ENST00000357604 SNTG1Q9NSN8 517 aa8□□□□□ -1.13
UPF2-202ENST00000357604 C1orf123Q9NWV4 160 aa8□□□□□ -1.13
UPF2-202ENST00000357604 UGT2A1Q9Y4X1 527 aa8□□□□□ -1.13
UPF2-202ENST00000357604 SLC25A15Q9Y619 301 aa8□□□□□ -1.13
UPF2-202ENST00000357604 C17orf51A8MQB3 221 aa8□□□□□ -1.13
UPF2-202ENST00000357604 TOR1AO14656 332 aa8□□□□□ -1.13
UPF2-202ENST00000357604 GSK3AP49840 483 aa8□□□□□ -1.13
UPF2-202ENST00000357604 LGALS4P56470 323 aa8□□□□□ -1.13
UPF2-202ENST00000357604 GNG2P59768 71 aa8□□□□□ -1.13
UPF2-202ENST00000357604 AP3S2P59780 193 aa8□□□□□ -1.13
UPF2-202ENST00000357604 GMFBP60983 142 aa8□□□□□ -1.13
UPF2-202ENST00000357604 H3F3AP84243 136 aa8□□□□□ -1.13
UPF2-202ENST00000357604 FBXL19-AS1Q494R0 122 aa8□□□□□ -1.13
UPF2-202ENST00000357604 NKAPLQ5M9Q1 402 aa8□□□□□ -1.13
UPF2-202ENST00000357604 SHEQ5VZ18 495 aa8□□□□□ -1.13
UPF2-202ENST00000357604 FAM168AQ92567 244 aa8□□□□□ -1.13
UPF2-202ENST00000357604 OPALINQ96PE5 141 aa8□□□□□ -1.13
UPF2-202ENST00000357604 GPR173Q9NS66 373 aa8□□□□□ -1.13
UPF2-202ENST00000357604 OR14J1Q9UGF5 321 aa8□□□□□ -1.13
UPF2-202ENST00000357604 PURGQ9UJV8 347 aaKnown RBP8□□□□□ -1.13
UPF2-202ENST00000357604 PIGBOS1A0A0B4J2F0 54 aa8□□□□□ -1.13
UPF2-202ENST00000357604 ZNHIT1O43257 154 aa8□□□□□ -1.13
UPF2-202ENST00000357604 EFNA2O43921 213 aa8□□□□□ -1.13
UPF2-202ENST00000357604 CRTAPO75718 401 aaPredicted RBP8□□□□□ -1.13
UPF2-202ENST00000357604 BPNT1O95861 308 aa8□□□□□ -1.13
UPF2-202ENST00000357604 PLATP00750 562 aa8□□□□□ -1.13
UPF2-202ENST00000357604 SLC25A16P16260 332 aa8□□□□□ -1.13
UPF2-202ENST00000357604 ZNF787Q6DD87 383 aa8□□□□□ -1.13
UPF2-202ENST00000357604 SCCPDHQ8NBX0 429 aa8□□□□□ -1.13
UPF2-202ENST00000357604 OR56B2PQ8NGI1 322 aa8□□□□□ -1.13
UPF2-202ENST00000357604 ACOT12Q8WYK0 555 aa8□□□□□ -1.13
UPF2-202ENST00000357604 SCGB3A2Q96PL1 93 aa8□□□□□ -1.13
UPF2-202ENST00000357604 CLCC1Q96S66 551 aa8□□□□□ -1.13
UPF2-202ENST00000357604 ABCB10Q9NRK6 738 aa8□□□□□ -1.13
UPF2-202ENST00000357604 CA10Q9NS85 328 aa8□□□□□ -1.13
UPF2-202ENST00000357604 MIOXQ9UGB7 285 aa8□□□□□ -1.13
UPF2-202ENST00000357604 NDUFS8O00217 210 aa8□□□□□ -1.13
UPF2-202ENST00000357604 TNFSF13O75888 250 aa8□□□□□ -1.13
UPF2-202ENST00000357604 RGS11O94810 467 aa8□□□□□ -1.13
UPF2-202ENST00000357604 MAS1P04201 325 aa8□□□□□ -1.13
UPF2-202ENST00000357604 IGFBP1P08833 259 aaPredicted RBP8□□□□□ -1.13
UPF2-202ENST00000357604 CECR9P0C854 216 aa8□□□□□ -1.13
UPF2-202ENST00000357604 CD36P16671 472 aa8□□□□□ -1.13
UPF2-202ENST00000357604 COX5AP20674 150 aa8□□□□□ -1.13
UPF2-202ENST00000357604 RCVRNP35243 200 aa8□□□□□ -1.13
UPF2-202ENST00000357604 DEFA1P59665 94 aa8□□□□□ -1.13
UPF2-202ENST00000357604 DEFA3P59666 94 aa8□□□□□ -1.13
UPF2-202ENST00000357604 ADARB1P78563 741 aaKnown RBP8□□□□□ -1.13
UPF2-202ENST00000357604 LTBQ06643 244 aa8□□□□□ -1.13
UPF2-202ENST00000357604 ARFRP1Q13795 201 aa8□□□□□ -1.13
UPF2-202ENST00000357604 DTX3Q8N9I9 347 aa8□□□□□ -1.13
UPF2-202ENST00000357604 BHLHE23Q8NDY6 225 aa8□□□□□ -1.13
UPF2-202ENST00000357604 C19orf18Q8NEA5 215 aa8□□□□□ -1.13
UPF2-202ENST00000357604 OR1M1Q8NGA1 313 aa8□□□□□ -1.13
UPF2-202ENST00000357604 CHCHD6Q9BRQ6 235 aa8□□□□□ -1.13
UPF2-202ENST00000357604 NTN4Q9HB63 628 aa8□□□□□ -1.13
UPF2-202ENST00000357604 GON4LQ3T8J9 2241 aa8□□□□□ -1.13
UPF2-202ENST00000357604 IGLV1-36A0A0B4J1U3 117 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 M0R129 80 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 CPT2P23786 658 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 ZNF133P52736 654 aaPredicted RBP7.99□□□□□ -1.13
UPF2-202ENST00000357604 TBCEQ15813 527 aaPredicted RBP7.99□□□□□ -1.13
UPF2-202ENST00000357604 SPIN3Q5JUX0 258 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 TRAT1Q6PIZ9 186 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 TPRA1Q86W33 373 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 OR8G5Q8NG78 346 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 GCDHQ92947 438 aaPredicted RBP7.99□□□□□ -1.13
UPF2-202ENST00000357604 RASL12Q9NYN1 266 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 GHRLQ9UBU3 117 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 FOXJ3Q9UPW0 622 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 LIPKQ5VXJ0 399 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 TRIQKQ629K1 86 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 ZNF611Q8N823 705 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 BBS1Q8NFJ9 593 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 RNASE11Q8TAA1 199 aaKnown RBP7.99□□□□□ -1.13
UPF2-202ENST00000357604 NPRL2Q8WTW4 380 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 MRPL24Q96A35 216 aaKnown RBP7.99□□□□□ -1.13
UPF2-202ENST00000357604 FGGYQ96C11 551 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 S100A16Q96FQ6 103 aaKnown RBP7.99□□□□□ -1.13
UPF2-202ENST00000357604 WNT5BQ9H1J7 359 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 ADGRL4Q9HBW9 690 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 PPP1R3CQ9UQK1 317 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 SDK2Q58EX2 2172 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 LRP5LA4QPB2 252 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms