RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 SLC35G6P0C7Q6 338 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 TAS2R31P59538 309 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 ARHGAP19Q14CB8 494 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 ZNF684Q5T5D7 378 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 ZNF627Q7L945 461 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 OR51L1Q8NGJ5 315 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 SMARCD2Q92925 531 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 WFIKKN1Q96NZ8 548 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 RARRES2Q99969 163 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 SLC26A1Q9H2B4 701 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 DYRK1BQ9Y463 629 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 ANAPC1Q9H1A4 1944 aa14.08□□□□□ -0.15
RTN3-205ENST00000356000 A0A0U1RQV5 110 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 OR4C45A6NMZ5 311 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 PPBPP02775 128 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 GALNSP34059 522 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 GABRA4P48169 554 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 FHITP49789 147 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 POLR2HP52434 150 aaKnown RBP14.08□□□□□ -0.16
RTN3-205ENST00000356000 KLF3P57682 345 aaPredicted RBP14.08□□□□□ -0.16
RTN3-205ENST00000356000 TBPL1P62380 186 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 HSF1Q00613 529 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 RAB11BQ15907 218 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 RNF219Q5W0B1 726 aaPredicted RBP14.08□□□□□ -0.16
RTN3-205ENST00000356000 POC1AQ8NBT0 407 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 NUDT10Q8NFP7 164 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 OR51A2Q8NGJ7 313 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 C2orf50Q96LR7 162 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 SEPSECSQ9HD40 501 aaKnown RBP14.08□□□□□ -0.16
RTN3-205ENST00000356000 LANCL2Q9NS86 450 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 STRAPQ9Y3F4 350 aaKnown RBP14.08□□□□□ -0.16
RTN3-205ENST00000356000 H0YL77 283 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 MBPP02686 304 aaPredicted RBP14.08□□□□□ -0.16
RTN3-205ENST00000356000 RPL12P30050 165 aaKnown RBP14.08□□□□□ -0.16
RTN3-205ENST00000356000 RND2P52198 227 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 SLC25A1P53007 311 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 TGM3Q08188 693 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 NUFIP2Q7Z417 695 aaKnown RBP14.08□□□□□ -0.16
RTN3-205ENST00000356000 FAM185AQ8N0U4 392 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 FAM160A2Q8N612 972 aaPredicted RBP14.08□□□□□ -0.16
RTN3-205ENST00000356000 ZNF740Q8NDX6 193 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 NOXO1Q8NFA2 376 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 OR13C9Q8NGT0 318 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 OR4X1Q8NH49 305 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 FAM174AQ8TBP5 190 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 RNF128Q8TEB7 428 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 TMEM239Q8WW34 195 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 TVP23CQ96ET8 276 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 SLC41A2Q96JW4 573 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 OR2J1Q9GZK6 312 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 SRPK3Q9UPE1 567 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 COL4A6Q14031 1691 aa14.08□□□□□ -0.16
RTN3-205ENST00000356000 TRBV11-1A0A0K0K1C0 115 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 C20orf202A1L168 122 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 FTCDNL1E5RQL4 147 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 HMGN2P05204 90 aaKnown RBP14.07□□□□□ -0.16
RTN3-205ENST00000356000 OR4Q2P0C623 313 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 DIO1P49895 249 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 METRNLQ641Q3 311 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 MDGA2Q7Z553 956 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 FAM219AQ8IW50 185 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 GCNT2Q8N0V5 402 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 KDM8Q8N371 416 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 TMEM159Q96B96 161 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 SGPP1Q9BX95 441 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 RAB22AQ9UL26 194 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 FCF1Q9Y324 198 aaKnown RBP14.07□□□□□ -0.16
RTN3-205ENST00000356000 TRAV27A0A087WT01 109 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 PRR32B1ATL7 298 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 MASP2O00187 686 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 SLC17A2O00624 439 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 SPEM2Q0P670 501 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 OR4C11Q6IEV9 310 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 FAM166AQ6J272 317 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 ZNF429Q86V71 674 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 OR10C1Q96KK4 312 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 OR11A1Q9GZK7 315 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 SERTAD3Q9UJW9 196 aa14.07□□□□□ -0.16
RTN3-205ENST00000356000 SMIM35A0A1B0GVV1 85 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 B3GAT3O94766 335 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 FCGR2CP31995 323 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 BSGP35613 385 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 PDLIM4P50479 330 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 COL5A1-AS1Q5SY13 56 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 PHF19Q5T6S3 580 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 NXPE4Q6UWF7 544 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 MFSD9Q8NBP5 474 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 OR52E1Q8NGJ3 308 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 OR52E2Q8NGJ4 325 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 ZNF480Q8WV37 535 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 BPIFA2Q96DR5 249 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 FRRS1LQ9P0K9 344 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 MDC1Q14676 2089 aaKnown RBP14.06□□□□□ -0.16
RTN3-205ENST00000356000 TRBV24-1A0A075B6N3 115 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 C1QTNF3-AMACRE9PGA6 284 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 CCL25O15444 150 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 KLK2P20151 261 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 CCKARP32238 428 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 PPP1CCP36873 323 aaKnown RBP14.06□□□□□ -0.16
RTN3-205ENST00000356000 TMEM33P57088 247 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms