RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 AK3Q9UIJ7 227 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 SPRY3O43610 288 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 GPX5O75715 221 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 MT-CO3P00414 261 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 TAS2R45P59539 299 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 BTG1P62324 171 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 ZNF766Q5HY98 468 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 SPNS2Q8IVW8 549 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 LFNGQ8NES3 379 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 CADM4Q8NFZ8 388 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 MARC2Q969Z3 335 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 FYTTD1Q96QD9 318 aaKnown RBP16.29■□□□□ 0.2
COL18A1-202ENST00000355480 BARX1Q9HBU1 254 aaPredicted RBP16.29■□□□□ 0.2
COL18A1-202ENST00000355480 ZNF724A8MTY0 619 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 DEFB124Q8NES8 71 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 CDK5R1Q15078 307 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 FOXB1Q99853 325 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 SOX7Q9BT81 388 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 FN3KRPQ9HA64 309 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 RNF150Q9ULK6 438 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 B9D1Q9UPM9 204 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 IAPPP10997 89 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 CTRB1P17538 263 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 DTYMKP23919 212 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 CTRB2Q6GPI1 263 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.28■□□□□ 0.2
COL18A1-202ENST00000355480 TNFRSF12AQ9NP84 129 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 METTL15P1P0C7V9 234 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 PI3P19957 117 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 STAC2Q6ZMT1 411 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 WNT16Q9UBV4 365 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 M0QZ24 198 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 OR10A3P58181 314 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 B4GALNT1Q00973 533 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 DDOQ99489 341 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 URGCP-MRPS24S4R325 110 aa16.28■□□□□ 0.2
COL18A1-202ENST00000355480 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
COL18A1-202ENST00000355480 A0A087WUJ7 227 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 SHISA8B8ZZ34 492 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 EIF3IQ13347 325 aaKnown RBP16.27■□□□□ 0.2
COL18A1-202ENST00000355480 DMRTC1Q5HYR2 192 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 SCARB1Q8WTV0 552 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 TOGARAM1Q9Y4F4 1720 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 OR5H8P0DN80 308 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 PHYHD1Q5SRE7 291 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 TMEM230Q96A57 120 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 TRMT61AQ96FX7 289 aaKnown RBP16.27■□□□□ 0.2
COL18A1-202ENST00000355480 P4HTMQ9NXG6 502 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 BOLA1Q9Y3E2 137 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 NME2P1O60361 137 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 TRA2AQ13595 282 aaKnown RBP eCLIP16.27■□□□□ 0.2
COL18A1-202ENST00000355480 TOR2AQ5JU69 321 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 PTOV1Q86YD1 416 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 CMTM4Q8IZR5 234 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 FBXL14Q8N1E6 418 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 OSR2Q8N2R0 312 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 C20orf24Q9BUV8 137 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 PLA2G2FQ9BZM2 168 aa16.27■□□□□ 0.2
COL18A1-202ENST00000355480 IFITM5A6NNB3 132 aa16.27■□□□□ 0.19
COL18A1-202ENST00000355480 APOBEC3DQ96AK3 386 aaPredicted RBP16.27■□□□□ 0.19
COL18A1-202ENST00000355480 NDFIP1Q9BT67 221 aa16.27■□□□□ 0.19
COL18A1-202ENST00000355480 A0A0B4J203 849 aa16.27■□□□□ 0.19
COL18A1-202ENST00000355480 FOSL1P15407 271 aa16.27■□□□□ 0.19
COL18A1-202ENST00000355480 SPRY1O43609 319 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-202ENST00000355480 TGM1P22735 817 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 HRH1P35367 487 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 GPM6AP51674 278 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 ANKRD34AQ69YU3 496 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 APH1BQ8WW43 257 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 EDARADDQ8WWZ3 215 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 STRAPQ9Y3F4 350 aaKnown RBP16.26■□□□□ 0.19
COL18A1-202ENST00000355480 OR5H15A6NDH6 313 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 OR5H14A6NHG9 310 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 OR5H1A6NKK0 313 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 GP2P55259 537 aaKnown RBP16.26■□□□□ 0.19
COL18A1-202ENST00000355480 FAAP20Q6NZ36 180 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 C17orf107Q6ZR85 190 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 TVP23CQ96ET8 276 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 R4GN57 208 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 ADAMTSL3P82987 1691 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 GIPP09681 153 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-202ENST00000355480 MGMTP16455 207 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 FAHP16930 419 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 TP53I13Q8NBR0 393 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-202ENST00000355480 TAAR6Q96RI8 345 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 TRGV10A0A0A0MS01 117 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 OR7C2O60412 319 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 BPIFB3P59826 476 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 BAMBIQ13145 260 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 GSG1Q2KHT4 349 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 LCN15Q6UWW0 184 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 LINC01387J3KSC0 135 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 ABCD3P28288 659 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 FUT6P51993 359 aa16.26■□□□□ 0.19
COL18A1-202ENST00000355480 GNPNAT1Q96EK6 184 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-202ENST00000355480 RPP25Q9BUL9 199 aaKnown RBP16.26■□□□□ 0.19
COL18A1-202ENST00000355480 TAAR5O14804 337 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 NDUFB3O43676 98 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 TNFRSF1AP19438 455 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 RAB1AP62820 205 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms