RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 RAB3BP20337 219 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 CCL1P22362 96 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 CCNOP22674 350 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 CAV3P56539 151 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 SNAI3Q3KNW1 292 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 BHLHA15Q7RTS1 189 aaPredicted RBP13.56□□□□□ -0.24
CTSA-202ENST00000354880 MRGPRGQ86SM5 289 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 ZNF75AQ96N20 296 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 SLITRK2Q9H156 845 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 MMP27Q9H306 513 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 ANKRD61A6NGH8 418 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 A8MXE2 369 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 IGLV3-1P01715 115 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 APLNRP35414 380 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 ST3GAL2Q16842 350 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 STAC2Q6ZMT1 411 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 DOK3Q7L591 496 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 NR2C2APQ86WQ0 139 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 WDR31Q8NA23 367 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 TBC1D15Q8TC07 691 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 MS4A3Q96HJ5 214 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 POM121L2Q96KW2 1035 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 C1QTNF5Q9BXJ0 243 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 OBP2BQ9NPH6 170 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 ZNF275Q9NSD4 429 aaPredicted RBP13.55□□□□□ -0.24
CTSA-202ENST00000354880 OSGIN2Q9Y236 505 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 IGSF10Q6WRI0 2623 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 MYO7BQ6PIF6 2116 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 CCL2P13500 99 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 PSMB1P20618 241 aaKnown RBP13.55□□□□□ -0.24
CTSA-202ENST00000354880 IL32P24001 234 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 FAM71F1Q96KD3 344 aaPredicted RBP13.55□□□□□ -0.24
CTSA-202ENST00000354880 LYZL4Q96KX0 146 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 SOX7Q9BT81 388 aa13.55□□□□□ -0.24
CTSA-202ENST00000354880 C6orf62Q9GZU0 229 aaPredicted RBP13.55□□□□□ -0.24
CTSA-202ENST00000354880 PLEKHB1Q9UF11 243 aaPredicted RBP13.55□□□□□ -0.24
CTSA-202ENST00000354880 A0A075B6Q4 140 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 TRAV8-7A0A075B6U6 113 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 PDCD5O14737 125 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 LMX1BO60663 402 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 ZNF12P17014 697 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 ZNF14P17017 642 aaPredicted RBP13.54□□□□□ -0.24
CTSA-202ENST00000354880 OR10A3P58181 314 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 CEP78Q5JTW2 689 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 COLCA1Q6ZS62 124 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 CROCCP3Q8IVE0 287 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 PLPP7Q8NBV4 271 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 SLC30A7Q8NEW0 376 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 SGK3Q96BR1 496 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 CKLFQ9UBR5 152 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 ZNF391Q9UJN7 358 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 FOXJ3Q9UPW0 622 aa13.54□□□□□ -0.24
CTSA-202ENST00000354880 AK6Q9Y3D8 172 aaKnown RBP13.54□□□□□ -0.24
CTSA-202ENST00000354880 A0A0G2JK05 382 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 OR5H1A6NKK0 313 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 CBR1P16152 277 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 FSTP19883 344 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 BMXP51813 675 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 SFXN4Q6P4A7 337 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 LINC00299Q6ZSB3 139 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 LIX1LQ8IVB5 337 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 PARP16Q8N5Y8 322 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 RELL2Q8NC24 303 aaPredicted RBP13.53□□□□□ -0.24
CTSA-202ENST00000354880 OR1J2Q8NGS2 313 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 OR2AE1Q8NHA4 323 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 AP3S1Q92572 193 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 FGGYQ96C11 551 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 RGCCQ9H4X1 137 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 AMDHD2Q9Y303 409 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 NOTOA8MTQ0 251 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 MTRF1O75570 445 aaKnown RBP13.53□□□□□ -0.24
CTSA-202ENST00000354880 DHRS3O75911 302 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 IGKV3-15P01624 115 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 MAS1P04201 325 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 CFL1P23528 166 aaKnown RBP13.53□□□□□ -0.24
CTSA-202ENST00000354880 IDH3GP51553 393 aaPredicted RBP13.53□□□□□ -0.24
CTSA-202ENST00000354880 TBC1D28Q2M2D7 210 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 TIMM23BQ5SRD1 257 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 ASPHD2Q6ICH7 369 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 Q6ZSR3 168 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 LRRTM1Q86UE6 522 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 SERPINA12Q8IW75 414 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 CCDC54Q8NEL0 328 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 OR6Q1Q8NGQ2 317 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 OR14K1Q8NGZ2 314 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 ADAT3Q96EY9 351 aaPredicted RBP13.53□□□□□ -0.24
CTSA-202ENST00000354880 REEP6Q96HR9 211 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 PLEKHA1Q9HB21 404 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 JKAMPQ9P055 326 aa13.53□□□□□ -0.24
CTSA-202ENST00000354880 CRNNQ9UBG3 495 aaPredicted RBP13.53□□□□□ -0.24
CTSA-202ENST00000354880 CCL21O00585 134 aa13.52□□□□□ -0.25
CTSA-202ENST00000354880 XRCC2O43543 280 aa13.52□□□□□ -0.25
CTSA-202ENST00000354880 AGFG2O95081 481 aa13.52□□□□□ -0.25
CTSA-202ENST00000354880 CELA3BP08861 270 aa13.52□□□□□ -0.25
CTSA-202ENST00000354880 ZNF20P17024 532 aa13.52□□□□□ -0.25
CTSA-202ENST00000354880 IGFBP3P17936 291 aaPredicted RBP13.52□□□□□ -0.25
CTSA-202ENST00000354880 ADRA2CP18825 462 aa13.52□□□□□ -0.25
CTSA-202ENST00000354880 GNALP38405 381 aa13.52□□□□□ -0.25
CTSA-202ENST00000354880 FAM27E3Q08E93 113 aa13.52□□□□□ -0.25
CTSA-202ENST00000354880 MRPL49Q13405 166 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms