RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 LYZL4Q96KX0 146 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 ABRACLQ9P1F3 81 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 ADAM30Q9UKF2 790 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 ATMQ13315 3056 aa17.89■□□□□ 0.46
TRIM4-202ENST00000354241 NCOR2Q9Y618 2525 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 A0A0U1RQV5 110 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 CIB4A0PJX0 185 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 FAM25AB3EWG3 89 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 FAM25CB3EWG5 89 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 FAM25GB3EWG6 89 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 PRRG2O14669 202 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 CNOT4O95628 575 aaKnown RBP17.89■□□□□ 0.45
TRIM4-202ENST00000354241 CD40LGP29965 261 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 SERPINA12Q8IW75 414 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 SAMD12Q8N8I0 201 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 STARD4Q96DR4 205 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 PLSCR4Q9NRQ2 329 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 ATPIF1Q9UII2 106 aa17.89■□□□□ 0.45
TRIM4-202ENST00000354241 INTS1Q8N201 2190 aaKnown RBP17.89■□□□□ 0.45
TRIM4-202ENST00000354241 SLC19A2O60779 497 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 PSMD7P51665 324 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 MADCAM1Q13477 382 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 FAM131AQ6UXB0 335 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 DPPA2Q7Z7J5 298 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 OR51A2Q8NGJ7 313 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 OPN3Q9H1Y3 402 aaPredicted RBP17.88■□□□□ 0.45
TRIM4-202ENST00000354241 SP140LQ9H930 580 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 PLEKHA1Q9HB21 404 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 V9GYH0 126 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 IGLV3-1P01715 115 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 CRHP06850 196 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 HOXD4P09016 255 aaPredicted RBP17.88■□□□□ 0.45
TRIM4-202ENST00000354241 ZNF12P17014 697 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 CCNOP22674 350 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 CLDN12P56749 244 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 PLP2Q04941 152 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 SPOCK1Q08629 439 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 GSG1Q2KHT4 349 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 CNIH2Q6PI25 160 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 SNX29P2Q8IUI4 249 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 ZNF610Q8N9Z0 462 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 PLPP7Q8NBV4 271 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 NAXEQ8NCW5 288 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 OR5H6Q8NGV6 325 aa17.88■□□□□ 0.45
TRIM4-202ENST00000354241 TP63Q9H3D4 680 aaPredicted RBP17.88■□□□□ 0.45
TRIM4-202ENST00000354241 FABP12A6NFH5 140 aa17.87■□□□□ 0.45
TRIM4-202ENST00000354241 TTLL8A6PVC2 850 aa17.87■□□□□ 0.45
TRIM4-202ENST00000354241 ELK1P19419 428 aa17.87■□□□□ 0.45
TRIM4-202ENST00000354241 STOMP27105 288 aa17.87■□□□□ 0.45
TRIM4-202ENST00000354241 TIMP3P35625 211 aa17.87■□□□□ 0.45
TRIM4-202ENST00000354241 TSC22D1Q15714 1073 aa17.87■□□□□ 0.45
TRIM4-202ENST00000354241 EIF2S3LQ2VIR3 472 aaKnown RBP17.87■□□□□ 0.45
TRIM4-202ENST00000354241 OR5D14Q8NGL3 314 aa17.87■□□□□ 0.45
TRIM4-202ENST00000354241 OR14K1Q8NGZ2 314 aa17.87■□□□□ 0.45
TRIM4-202ENST00000354241 OR2AE1Q8NHA4 323 aa17.87■□□□□ 0.45
TRIM4-202ENST00000354241 LGALS14Q8TCE9 139 aa17.87■□□□□ 0.45
TRIM4-202ENST00000354241 SGK3Q96BR1 496 aa17.87■□□□□ 0.45
TRIM4-202ENST00000354241 PALMDQ9NP74 551 aa17.87■□□□□ 0.45
TRIM4-202ENST00000354241 LOC100509620A0A075B734 347 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 C5orf49A4QMS7 147 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 CGAP01215 116 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 COX5BP10606 129 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 CCL2P13500 99 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 UBE2NP61088 152 aaKnown RBP17.86■□□□□ 0.45
TRIM4-202ENST00000354241 KLRB1Q12918 225 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 MDP1Q86V88 176 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 ZGRF1Q86YA3 2104 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 DOLPP1Q86YN1 238 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 ZFP3Q96NJ6 502 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 PRORYQ9H606 182 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 LIN7BQ9HAP6 207 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 B3GNT2Q9NY97 397 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 PIEZO2Q9H5I5 2752 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 DHRS3O75911 302 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 EIF4EP06730 217 aaKnown RBP17.86■□□□□ 0.45
TRIM4-202ENST00000354241 COX5AP20674 150 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 DDOSTP39656 456 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 EVX1P49640 407 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 GABRA6Q16445 453 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 GLT8D1Q68CQ7 371 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 OR13C9Q8NGT0 318 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 REEP6Q96HR9 211 aa17.86■□□□□ 0.45
TRIM4-202ENST00000354241 NKX3-1Q99801 234 aaPredicted RBP17.86■□□□□ 0.45
TRIM4-202ENST00000354241 A0A1W2PR80 420 aa17.85■□□□□ 0.45
TRIM4-202ENST00000354241 GLYATL3Q5SZD4 288 aa17.85■□□□□ 0.45
TRIM4-202ENST00000354241 LRRC28Q86X40 367 aaPredicted RBP17.85■□□□□ 0.45
TRIM4-202ENST00000354241 GABRG1Q8N1C3 465 aa17.85■□□□□ 0.45
TRIM4-202ENST00000354241 OR1M1Q8NGA1 313 aa17.85■□□□□ 0.45
TRIM4-202ENST00000354241 EXTL2Q9UBQ6 330 aa17.85■□□□□ 0.45
TRIM4-202ENST00000354241 STEAP1Q9UHE8 339 aa17.85■□□□□ 0.45
TRIM4-202ENST00000354241 SPATA2Q9UM82 520 aa17.85■□□□□ 0.45
TRIM4-202ENST00000354241 V9GYS6 101 aa17.85■□□□□ 0.45
TRIM4-202ENST00000354241 MEGF11A6BM72 1044 aa17.84■□□□□ 0.45
TRIM4-202ENST00000354241 TMEM127O75204 238 aa17.84■□□□□ 0.45
TRIM4-202ENST00000354241 MTRF1O75570 445 aaKnown RBP17.84■□□□□ 0.45
TRIM4-202ENST00000354241 GLI4P10075 376 aa17.84■□□□□ 0.45
TRIM4-202ENST00000354241 RAB3AP20336 220 aa17.84■□□□□ 0.45
TRIM4-202ENST00000354241 AZGP1P25311 298 aaKnown RBP17.84■□□□□ 0.45
TRIM4-202ENST00000354241 BDKRB2P30411 391 aa17.84■□□□□ 0.45
TRIM4-202ENST00000354241 ZNF584Q8IVC4 421 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms