RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 NSG2Q9Y328 171 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 TOPAZ1Q8N9V7 1692 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 VMA21Q3ZAQ7 101 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 SOWAHCQ53LP3 525 aaPredicted RBP20.91■□□□□ 0.94
NPAS3-201ENST00000346562 MOB3AQ96BX8 217 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 KLK10O43240 276 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 AKR1C3P42330 323 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 MOB3BQ86TA1 216 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 ZNF835Q9Y2P0 537 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 C5P01031 1676 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 AQP7P3A6NL99 342 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 H7BYZ3 331 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 ZNF26P17031 533 aaPredicted RBP20.9■□□□□ 0.94
NPAS3-201ENST00000346562 ARNTP27540 789 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 WBP2Q969T9 261 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 GPR78Q96P69 363 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 PLEKHA2Q9HB19 425 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 RYDENQ9NUL5 291 aaKnown RBP20.9■□□□□ 0.94
NPAS3-201ENST00000346562 TRGV5A0A0B4J1U4 118 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 ZDHHC11BP0C7U3 371 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 ZNF766Q5HY98 468 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 OR11G2Q8NGC1 345 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 FBXO17Q96EF6 278 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 UPK1AO00322 258 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 DDOSTP39656 456 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 ZNF239Q16600 458 aaKnown RBP20.9■□□□□ 0.94
NPAS3-201ENST00000346562 TVP23CQ96ET8 276 aa20.9■□□□□ 0.94
NPAS3-201ENST00000346562 ARRDC5A6NEK1 342 aa20.89■□□□□ 0.94
NPAS3-201ENST00000346562 CEACAM5P06731 702 aa20.89■□□□□ 0.94
NPAS3-201ENST00000346562 SLC38A6Q8IZM9 456 aa20.89■□□□□ 0.94
NPAS3-201ENST00000346562 CXCL10P02778 98 aa20.89■□□□□ 0.94
NPAS3-201ENST00000346562 ATF1P18846 271 aa20.89■□□□□ 0.94
NPAS3-201ENST00000346562 HNF1AP20823 631 aa20.89■□□□□ 0.94
NPAS3-201ENST00000346562 Q6ZNB5 142 aa20.89■□□□□ 0.94
NPAS3-201ENST00000346562 ST8SIA4Q92187 359 aa20.89■□□□□ 0.94
NPAS3-201ENST00000346562 NCBP2LA6PVI3 153 aaKnown RBP20.89■□□□□ 0.93
NPAS3-201ENST00000346562 THBS4P35443 961 aa20.89■□□□□ 0.93
NPAS3-201ENST00000346562 ZNF121P58317 390 aaPredicted RBP20.89■□□□□ 0.93
NPAS3-201ENST00000346562 SLC25A26Q70HW3 274 aa20.89■□□□□ 0.93
NPAS3-201ENST00000346562 POM121L2Q96KW2 1035 aa20.89■□□□□ 0.93
NPAS3-201ENST00000346562 ST3GAL6Q9Y274 331 aa20.89■□□□□ 0.93
NPAS3-201ENST00000346562 FBP1P09467 338 aa20.89■□□□□ 0.93
NPAS3-201ENST00000346562 N4BP2Q86UW6 1770 aaPredicted RBP20.89■□□□□ 0.93
NPAS3-201ENST00000346562 TMEM235A6NFC5 223 aa20.89■□□□□ 0.93
NPAS3-201ENST00000346562 GOSR1O95249 250 aa20.89■□□□□ 0.93
NPAS3-201ENST00000346562 ZFP62Q8NB50 900 aaPredicted RBP20.89■□□□□ 0.93
NPAS3-201ENST00000346562 NHLRC2Q8NBF2 726 aa20.89■□□□□ 0.93
NPAS3-201ENST00000346562 LRRC61Q9BV99 259 aa20.89■□□□□ 0.93
NPAS3-201ENST00000346562 CLCF1Q9UBD9 225 aa20.89■□□□□ 0.93
NPAS3-201ENST00000346562 URGCP-MRPS24S4R325 110 aa20.89■□□□□ 0.93
NPAS3-201ENST00000346562 ZAR1LA6NP61 321 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 SPRY3O43610 288 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 TMEM196Q5HYL7 178 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 PCNPQ8WW12 178 aaKnown RBP20.88■□□□□ 0.93
NPAS3-201ENST00000346562 C20orf24Q9BUV8 137 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 LMO7DNF2Z398 122 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 ACSM5Q6NUN0 579 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 CCDC71Q8IV32 467 aaPredicted RBP20.88■□□□□ 0.93
NPAS3-201ENST00000346562 MZB1Q8WU39 189 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.88■□□□□ 0.93
NPAS3-201ENST00000346562 SMIM19Q96E16 107 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 OR51I2Q9H344 312 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 DBX1A6NMT0 343 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 SLC39A7Q92504 469 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 ZNF416Q9BWM5 594 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 SPTY2D1-AS1A0A0U1RR47 76 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 TMEM30CPA0ZSE6 113 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 FAM221AA4D161 298 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 OR2C1O95371 312 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 AQP6Q13520 282 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 GSG1Q2KHT4 349 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 LRP3O75074 770 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 OPRM1P35372 400 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 SIGLEC11Q96RL6 698 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 CDCA4Q9BXL8 241 aa20.88■□□□□ 0.93
NPAS3-201ENST00000346562 PIAS2O75928 621 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 PDGFBP01127 241 aaPredicted RBP20.87■□□□□ 0.93
NPAS3-201ENST00000346562 ENDOGQ14249 297 aaKnown RBP20.87■□□□□ 0.93
NPAS3-201ENST00000346562 PLAC9Q5JTB6 97 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 ZNF787Q6DD87 383 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 LCN15Q6UWW0 184 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 ACOT7LQ6ZUV0 252 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 Q8IYB0 196 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 PARP12Q9H0J9 701 aaKnown RBP20.87■□□□□ 0.93
NPAS3-201ENST00000346562 HAGHQ16775 308 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 ZNF485Q8NCK3 441 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 LRRC3CA6NJW4 275 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 ZNF785A8K8V0 405 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 TFAP2AP05549 437 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 OR5H8P0DN80 308 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 RNPS1Q15287 305 aaKnown RBP20.87■□□□□ 0.93
NPAS3-201ENST00000346562 R3HDMLQ9H3Y0 253 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 SDCBPO00560 298 aaPredicted RBP20.87■□□□□ 0.93
NPAS3-201ENST00000346562 B4GALT3O60512 393 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 RPL12P30050 165 aaKnown RBP20.87■□□□□ 0.93
NPAS3-201ENST00000346562 HOXC8P31273 242 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 ABI3BPQ7Z7G0 1075 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 OR5M9Q8NGP3 310 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 ERGIC1Q969X5 290 aa20.87■□□□□ 0.93
NPAS3-201ENST00000346562 FOXB1Q99853 325 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms