RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 APOFQ13790 326 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 SNCBQ16143 134 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 TIGD6Q17RP2 521 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 TMEM255AQ5JRV8 349 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 KCTD18Q6PI47 426 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 Q6ZR03 302 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 NAA40Q86UY6 237 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 KLHL36Q8N4N3 616 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 SPICQ8N5J4 248 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 TEX29Q8N6K0 151 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 OR52H1Q8NGJ2 320 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 OTOSQ8NHW6 89 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 RNF133Q8WVZ7 376 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 RAB3IPQ96QF0 476 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 SLC30A2Q9BRI3 323 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 ZNF665Q9H7R5 613 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 NIPAL2Q9H841 368 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 UBAP1Q9NZ09 502 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 TMEFF2Q9UIK5 374 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 LAMP5Q9UJQ1 280 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 NPTNQ9Y639 398 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 CACNG2Q9Y698 323 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 TMEM14AQ9Y6G1 99 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 YLPM1P49750 1951 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 NIPBLQ6KC79 2804 aaeCLIP13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 MSMBP08118 114 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 SBK2P0C263 348 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 IL2RGP31785 369 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 SRP14P37108 136 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 OR8G1Q15617 311 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 CR1LQ2VPA4 569 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 FAM120AOSQ5T036 256 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 KRT77Q7Z794 578 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 TIGD4Q8IY51 512 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 FTMTQ8N4E7 242 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 SPERTQ8NA61 448 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 OR10AD1Q8NGE0 317 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 OR11L1Q8NGX0 322 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 ERGIC1Q969X5 290 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 C1orf159Q96HA4 380 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 PGAM5Q96HS1 289 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 MEGF10Q96KG7 1140 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 RBM4BQ9BQ04 359 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 YIPF3Q9GZM5 350 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 GABARAPL1Q9H0R8 117 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 OR10A2Q9H208 303 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 SEMA6AQ9H2E6 1030 aa13.35□□□□□ -0.27
TSPAN4-201ENST00000346501 ZANQ9Y493 2812 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 TRAV20A0A0B4J274 112 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 ANKRD30BLA7E2S9 258 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 CD300LBA8K4G0 201 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 GMDSO60547 372 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 SLC2A1P11166 492 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 NAA10P41227 235 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 ACTR3P61158 418 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 ZNF92Q03936 586 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 SCGB2A2Q13296 93 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 SNAI3Q3KNW1 292 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 KDM4DQ6B0I6 523 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 SLC16A9Q7RTY1 509 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 KLBQ86Z14 1044 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 MUC20Q8N307 709 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 CELF2-AS1Q8N7Q2 184 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 OR2AE1Q8NHA4 323 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 PYDC1Q8WXC3 89 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 TMEM186Q96B77 213 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 TEAD3Q99594 435 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 REPIN1Q9BWE0 567 aaKnown RBP13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 RGCCQ9H4X1 137 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 LPAR2Q9HBW0 351 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 DNAJC27Q9NZQ0 273 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 OAZ3Q9UMX2 235 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 VPS13CQ709C8 3753 aa13.34□□□□□ -0.27
TSPAN4-201ENST00000346501 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.33□□□□□ -0.283e-9■■■□□ 17.3
TSPAN4-201ENST00000346501 SLC22A31A6NKX4 558 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 SELENOFO60613 162 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 LMO4P61968 165 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 GLYATL3Q5SZD4 288 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 SLX4IPQ5VYV7 408 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 FAM57BQ71RH2 274 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 GID4Q8IVV7 300 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 TCEANCQ8N8B7 351 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 ASB17Q8WXJ9 295 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 SOX7Q9BT81 388 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 MROQ9BYG7 248 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 BRD7Q9NPI1 651 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 C14orf119Q9NWQ9 140 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 HIF1ANQ9NWT6 349 aa13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 MRPL15Q9P015 296 aaKnown RBP13.33□□□□□ -0.28
TSPAN4-201ENST00000346501 JMJD1CQ15652 2540 aa13.32□□□□□ -0.28
TSPAN4-201ENST00000346501 SAC3D1A6NKF1 404 aa13.32□□□□□ -0.28
TSPAN4-201ENST00000346501 ZAR1LA6NP61 321 aa13.32□□□□□ -0.28
TSPAN4-201ENST00000346501 F5H5P2 479 aa13.32□□□□□ -0.28
TSPAN4-201ENST00000346501 PHYHO14832 338 aa13.32□□□□□ -0.28
TSPAN4-201ENST00000346501 WNT9BO14905 357 aa13.32□□□□□ -0.28
TSPAN4-201ENST00000346501 MITFO75030 526 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-201ENST00000346501 IGHV2-5P01817 119 aa13.32□□□□□ -0.28
TSPAN4-201ENST00000346501 HLA-DPB1P04440 258 aa13.32□□□□□ -0.28
TSPAN4-201ENST00000346501 CA6P23280 308 aa13.32□□□□□ -0.28
TSPAN4-201ENST00000346501 GNALP38405 381 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms