RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 TPK1Q9H3S4 243 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 SIAEQ9HAT2 523 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 PLGRKTQ9HBL7 147 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 GRHPRQ9UBQ7 328 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 B9A039 149 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 INAFM1C9JVW0 142 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 LYNX1G3V0Z9 82 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 GLCEO94923 617 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 LYNX1P0DP58 116 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 NPR2P20594 1047 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 GABRA5P31644 462 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 EFNA4P52798 201 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 PSG4Q00888 419 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 GPR50Q13585 617 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 RAB35Q15286 201 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 SLC30A7Q8NEW0 376 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 MRPL24Q96A35 216 aaKnown RBP13.79□□□□□ -0.2
RAB5C-201ENST00000346213 EXOSC4Q9NPD3 245 aaKnown RBP13.79□□□□□ -0.2
RAB5C-201ENST00000346213 BABAM2Q9NXR7 383 aa13.79□□□□□ -0.2
RAB5C-201ENST00000346213 DNHD1Q96M86 4753 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 METTL15A6NJ78 407 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 VWC2LB2RUY7 222 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 F12P00748 615 aaPredicted RBP13.78□□□□□ -0.2
RAB5C-201ENST00000346213 MRPL3P09001 348 aaKnown RBP13.78□□□□□ -0.2
RAB5C-201ENST00000346213 OR2T7P0C7T2 308 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 ALDH3B1P43353 468 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 ZNF85Q03923 595 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 KRR1Q13601 381 aaKnown RBP13.78□□□□□ -0.2
RAB5C-201ENST00000346213 SGCAQ16586 387 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 ZNF829Q3KNS6 432 aaPredicted RBP13.78□□□□□ -0.2
RAB5C-201ENST00000346213 NRN1LQ496H8 165 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 ZBTB46Q86UZ6 589 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 OR2T27Q8NH04 317 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 ZMYND19Q96E35 227 aaPredicted RBP13.78□□□□□ -0.2
RAB5C-201ENST00000346213 CNN2Q99439 309 aaKnown RBP13.78□□□□□ -0.2
RAB5C-201ENST00000346213 TBX5Q99593 518 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 ZNF416Q9BWM5 594 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 NXF2Q9GZY0 626 aaKnown RBP13.78□□□□□ -0.2
RAB5C-201ENST00000346213 SYT4Q9H2B2 425 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 MMP27Q9H306 513 aa13.78□□□□□ -0.2
RAB5C-201ENST00000346213 RTTNQ86VV8 2226 aa13.77□□□□□ -0.2
RAB5C-201ENST00000346213 A0A1W2PPL8 197 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 PRSS37A4D1T9 235 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 ZNF670-ZNF695F2Z2N8 137 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 NCR1O76036 304 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 TFP02787 698 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 PPOXP50336 477 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 ZNF84P51523 738 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 BMXP51813 675 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 ALKBH6Q3KRA9 238 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 ZNF404Q494X3 552 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 LINC01590Q5TEZ4 76 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 CD200R1LQ6Q8B3 271 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 KLBQ86Z14 1044 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 OR6Q1Q8NGQ2 317 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 MCFD2Q8NI22 146 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 ZNRF4Q8WWF5 429 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 POM121L2Q96KW2 1035 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 SNX18Q96RF0 628 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 VRK1Q99986 396 aaPredicted RBP13.77□□□□□ -0.21
RAB5C-201ENST00000346213 SOX7Q9BT81 388 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 POFUT1Q9H488 388 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 ISG20L2Q9H9L3 353 aaKnown RBP13.77□□□□□ -0.21
RAB5C-201ENST00000346213 BARX1Q9HBU1 254 aaPredicted RBP13.77□□□□□ -0.21
RAB5C-201ENST00000346213 POLE4Q9NR33 117 aa13.77□□□□□ -0.21
RAB5C-201ENST00000346213 TXNL4BQ9NX01 149 aaKnown RBP13.77□□□□□ -0.21
RAB5C-201ENST00000346213 A0A1W2PQL4 384 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-201ENST00000346213 RENP00797 406 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 MT-ND5P03915 603 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 PSKH1P11801 424 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 OPRL1P41146 370 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 SNRPD2P62316 118 aaKnown RBP13.76□□□□□ -0.21
RAB5C-201ENST00000346213 RPS25P62851 125 aaKnown RBP13.76□□□□□ -0.21
RAB5C-201ENST00000346213 THEM4Q5T1C6 240 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 FAM27BQ5VT28 67 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 ZNF774Q6NX45 483 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 RFPL4BQ6ZWI9 263 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 SLC35F2Q8IXU6 374 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 OR51L1Q8NGJ5 315 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 S100ZQ8WXG8 99 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 BORCS5Q969J3 196 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 COQ7Q99807 217 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 CDADC1Q9BWV3 514 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 OR2H1Q9GZK4 316 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 RNF121Q9H920 327 aa13.76□□□□□ -0.21
RAB5C-201ENST00000346213 MOV10Q9HCE1 1003 aaKnown RBP13.76□□□□□ -0.21
RAB5C-201ENST00000346213 RPRD1BQ9NQG5 326 aaKnown RBP13.76□□□□□ -0.21
RAB5C-201ENST00000346213 VSX1Q9NZR4 365 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-201ENST00000346213 TRDV1A0A1B0GX56 115 aa13.75□□□□□ -0.21
RAB5C-201ENST00000346213 GAAP10253 952 aa13.75□□□□□ -0.21
RAB5C-201ENST00000346213 GALP22466 123 aa13.75□□□□□ -0.21
RAB5C-201ENST00000346213 ANOS1P23352 680 aa13.75□□□□□ -0.21
RAB5C-201ENST00000346213 FGF9P31371 208 aaPredicted RBP13.75□□□□□ -0.21
RAB5C-201ENST00000346213 GLRXP35754 106 aa13.75□□□□□ -0.21
RAB5C-201ENST00000346213 TAS2R43P59537 309 aa13.75□□□□□ -0.21
RAB5C-201ENST00000346213 HSF2Q03933 536 aa13.75□□□□□ -0.21
RAB5C-201ENST00000346213 MEP1BQ16820 701 aa13.75□□□□□ -0.21
RAB5C-201ENST00000346213 HDDC2Q7Z4H3 204 aa13.75□□□□□ -0.21
RAB5C-201ENST00000346213 CROCCP3Q8IVE0 287 aa13.75□□□□□ -0.21
RAB5C-201ENST00000346213 ZFP41Q8N8Y5 198 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms