RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ISYNA1Q9NPH2 558 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 FOXJ3Q9UPW0 622 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 LIPT2A6NK58 231 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 M0R135 149 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 RRASP10301 218 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 UBALD2Q8IYN6 164 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 ASB17Q8WXJ9 295 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 ZNF799Q96GE5 643 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 RALYQ9UKM9 306 aaKnown RBP11.82□□□□□ -0.52
CASC4-202ENST00000345795 B3GALT5Q9Y2C3 310 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 CENPBD1B2RD01 187 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 GABARAPH6UMI1 98 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 PHYHO14832 338 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 OGG1O15527 345 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 SYNGR4O95473 234 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 ECDO95905 644 aaPredicted RBP11.82□□□□□ -0.52
CASC4-202ENST00000345795 PHLDA2Q53GA4 152 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 ANKRD16Q6P6B7 361 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 C19orf48Q6RUI8 117 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 PEG10Q86TG7 708 aaKnown RBP11.82□□□□□ -0.52
CASC4-202ENST00000345795 TMEM104Q8NE00 496 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 CT55Q8WUE5 264 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 GPHA2Q96T91 129 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 ZNF649Q9BS31 505 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 FZR1Q9UM11 496 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 R4GMQ9 66 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 HEATR1Q9H583 2144 aaKnown RBP11.82□□□□□ -0.52
CASC4-202ENST00000345795 C5orf63A6NC05 138 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 CTAG2O75638 210 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 RBMXP38159 391 aaKnown RBP11.82□□□□□ -0.52
CASC4-202ENST00000345795 SLC35A1P78382 337 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 WDFY1Q8IWB7 410 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 OR1J2Q8NGS2 313 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 MARCH1Q8TCQ1 289 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 ST8SIA1Q92185 356 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 UTP23Q9BRU9 249 aaKnown RBP11.82□□□□□ -0.52
CASC4-202ENST00000345795 CA10Q9NS85 328 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 LTBP2Q14767 1821 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 FAM208BQ5VWN6 2430 aa11.82□□□□□ -0.52
CASC4-202ENST00000345795 IGKV3D-11A0A0A0MRZ8 115 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 A0A0J9YW62 118 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 hCG_1807616A0A1W2PRN6 198 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 MED19A0JLT2 244 aaPredicted RBP11.81□□□□□ -0.52
CASC4-202ENST00000345795 EFNA2O43921 213 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 RRADP55042 308 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 ABCA11PQ4W5N1 156 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 CD200R1LQ6Q8B3 271 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 BAIAP2L2Q6UXY1 529 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 CXorf67Q86X51 503 aaPredicted RBP11.81□□□□□ -0.52
CASC4-202ENST00000345795 SUMF1Q8NBK3 374 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 STEAP2Q8NFT2 490 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 OR1M1Q8NGA1 313 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 OR4K15Q8NH41 348 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 KIAA1143Q96AT1 154 aaPredicted RBP11.81□□□□□ -0.52
CASC4-202ENST00000345795 ITPKCQ96DU7 683 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 HIST1H2AAQ96QV6 131 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 MFFQ9GZY8 342 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 TCFL5Q9UL49 500 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 DCHS1Q96JQ0 3298 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 TRAV39A0A0B4J263 110 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 HSPA12AO43301 675 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 SGCEO43556 437 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 HLA-DQB1P01920 261 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 CLPSP04118 112 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 SLC6A1P30531 599 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 NUP62P37198 522 aaPredicted RBP11.81□□□□□ -0.52
CASC4-202ENST00000345795 BDH1Q02338 343 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 ELMOD2Q8IZ81 293 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 HDHD3Q9BSH5 251 aaPredicted RBP11.81□□□□□ -0.52
CASC4-202ENST00000345795 GLTPQ9NZD2 209 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 INTS1Q8N201 2190 aaKnown RBP11.81□□□□□ -0.52
CASC4-202ENST00000345795 C5orf49A4QMS7 147 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 SOCS1O15524 211 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 RAB40ALP0C0E4 278 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 MAGEA5P43359 124 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 GZMKP49863 264 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 SP6Q3SY56 376 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 GABRG1Q8N1C3 465 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 OR8B12Q8NGG6 310 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 OR5H2Q8NGV7 314 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 OR10D3Q8NH80 312 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 RAB40AQ8WXH6 277 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 HAVCR1Q96D42 359 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 MAP6Q96JE9 813 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 SORCS2Q96PQ0 1159 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 ZNF426Q9BUY5 554 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 TRAPPC4Q9Y296 219 aa11.81□□□□□ -0.52
CASC4-202ENST00000345795 A0A0G2JK05 382 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 DISC1C4P0D8 188 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 EFSO43281 561 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 MSX1P28360 303 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 THBS2P35442 1172 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 PLPPR5Q32ZL2 321 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 ALKBH6Q3KRA9 238 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 HES3Q5TGS1 186 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 TIGD3Q6B0B8 471 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 MRGPREQ86SM8 312 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 ZNF485Q8NCK3 441 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 PLPP5Q8NEB5 264 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 LRRC20Q8TCA0 184 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms